Strain Fitness in Escherichia coli BW25113 around b2118

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,197,342	+	yehH	b4499	0.75	+0.7
2,197,597	-	yehH	b4499	0.82	-1.6
2,197,597	-	yehH	b4499	0.82	+1.2
2,197,612	+	yehH	b4499	0.82	-2.2
2,197,612	+	yehH	b4499	0.82	+3.4
2,197,749	+	yehH	b4499	0.86	+0.6
2,197,843	-	yehH	b4499	0.88	+0.8
2,197,843	-	yehH	b4499	0.88	-0.6
2,197,878	-	yehH	b4499	0.89	+1.0
2,197,907	+	yehH	b4499	0.90	+0.9
2,197,922	+				-2.5
2,197,996	-				+0.0
2,197,996	-				+0.5
2,197,997	-				+1.2
2,197,997	-				+0.5
2,198,057	-				-1.5
2,198,072	-				-0.1
2,198,155	-				+0.1
2,198,279	+				-0.1
2,198,312	-				+1.2
2,198,436	+				+0.1
2,198,508	+				+1.8
2,198,539	-				+2.5
2,198,559	+				+0.4
2,198,560	+				+0.2
2,198,560	+				-1.0
2,198,586	+				-1.8
2,198,586	+				+1.7
2,198,591	+				-1.1
2,198,648	-				+2.3
2,198,699	+	yehI	b2118	0.11	-1.3
2,198,720	+	yehI	b2118	0.12	+1.7
2,198,720	+	yehI	b2118	0.12	-0.7
2,198,728	-	yehI	b2118	0.12	-1.3
2,198,728	-	yehI	b2118	0.12	+1.7
2,198,833	-	yehI	b2118	0.15	+0.9
2,198,840	+	yehI	b2118	0.15	+0.9
2,198,848	-	yehI	b2118	0.15	+2.7
2,198,902	-	yehI	b2118	0.17	-2.7
2,199,153	-	yehI	b2118	0.23	+1.1
2,199,153	-	yehI	b2118	0.23	+2.5
2,199,153	-	yehI	b2118	0.23	-0.7
2,199,168	-	yehI	b2118	0.24	+1.3
2,199,299	+	yehI	b2118	0.27	-1.3
2,199,425	-	yehI	b2118	0.31	+0.5
2,199,425	-	yehI	b2118	0.31	-2.6
2,199,496	-	yehI	b2118	0.33	-1.4
2,199,544	-	yehI	b2118	0.34	+1.4
2,199,544	-	yehI	b2118	0.34	+2.9
2,199,739	-	yehI	b2118	0.40	-0.3
2,199,782	-	yehI	b2118	0.41	-0.4
2,199,782	-	yehI	b2118	0.41	+0.3
2,199,802	+	yehI	b2118	0.41	-0.6
2,199,878	+	yehI	b2118	0.43	-1.2
2,199,878	+	yehI	b2118	0.43	-1.0
2,199,880	+	yehI	b2118	0.43	-2.2
2,199,901	-	yehI	b2118	0.44	-1.7
2,199,953	-	yehI	b2118	0.45	+1.1
2,200,063	-	yehI	b2118	0.48	+2.6
2,200,071	+	yehI	b2118	0.49	+0.1
2,200,145	+	yehI	b2118	0.51	+1.4
2,200,280	+	yehI	b2118	0.54	+0.9
2,200,355	-	yehI	b2118	0.57	-2.6
2,200,470	-	yehI	b2118	0.60	+0.6
2,200,481	-	yehI	b2118	0.60	+0.4
2,200,481	-	yehI	b2118	0.60	+1.9
2,200,539	+	yehI	b2118	0.62	+0.3
2,200,649	-	yehI	b2118	0.65	-0.5
2,200,649	-	yehI	b2118	0.65	+0.1
2,200,735	+	yehI	b2118	0.67	+0.8
2,200,841	-	yehI	b2118	0.70	+3.6
2,201,038	+	yehI	b2118	0.75	+1.3
2,201,043	+	yehI	b2118	0.75	+1.2
2,201,050	+	yehI	b2118	0.76	-3.0
2,201,050	+	yehI	b2118	0.76	+1.4
2,201,217	+	yehI	b2118	0.80	-0.0
2,201,225	-	yehI	b2118	0.80	-0.9
2,201,225	-	yehI	b2118	0.80	+0.2
2,201,259	-	yehI	b2118	0.81	-1.4
2,201,300	-	yehI	b2118	0.83	+1.0
2,201,304	+	yehI	b2118	0.83	-0.5
2,201,360	-	yehI	b2118	0.84	-0.8
2,201,360	-	yehI	b2118	0.84	+1.4
2,201,371	-	yehI	b2118	0.85	-0.3
2,201,411	+	yehI	b2118	0.86	-0.7
2,201,443	+	yehI	b2118	0.86	+3.5
2,201,613	+				-1.3
2,201,613	+				+1.3
2,201,613	+				+0.6
2,201,645	-				-0.4
2,201,709	+				+2.0
2,201,709	+				-1.3
2,201,746	+				+0.6
2,201,764	-				-0.9
2,201,833	+				+0.8
2,201,833	+				-2.6
2,201,838	+				+0.0
2,201,955	-				+0.6
2,202,021	+				+0.8
2,202,040	+	yehK	b4541	0.14	+2.5
2,202,102	+	yehK	b4541	0.34	-1.2
2,202,114	+	yehK	b4541	0.38	-0.5
2,202,116	+	yehK	b4541	0.38	-0.0
2,202,125	+	yehK	b4541	0.41	-1.0
2,202,125	+	yehK	b4541	0.41	+0.0
2,202,135	+	yehK	b4541	0.44	-2.1
2,202,152	+	yehK	b4541	0.50	-0.7
2,202,166	+	yehK	b4541	0.54	-0.5
2,202,166	+	yehK	b4541	0.54	-0.4
2,202,166	+	yehK	b4541	0.54	-1.8
2,202,174	-	yehK	b4541	0.57	-1.0
2,202,199	+	yehK	b4541	0.64	+0.9
2,202,431	+				-0.2
2,202,431	+				-2.9
2,202,437	+				-1.4
2,202,445	+				+2.1
2,202,445	+				-1.9
2,202,655	+				-0.1
2,202,662	+				-1.5
2,202,662	+				-1.3
2,202,663	-				+0.9
2,202,663	-				+0.2
2,202,663	-				-1.3
2,202,663	-				+0.2
2,202,665	-				-0.5
2,202,665	-				-2.8
2,202,665	-				-0.4
2,202,668	-				-0.1
2,202,670	-				+1.2
2,202,675	-				-1.3
2,202,675	-				-1.6
2,202,714	-				+0.4
2,202,719	-				-0.4
2,202,733	-	yehL	b2119	0.11	+1.1
2,202,733	-	yehL	b2119	0.11	+1.8
2,202,751	+	yehL	b2119	0.12	-1.8
2,202,751	+	yehL	b2119	0.12	-1.1
2,202,790	+	yehL	b2119	0.16	+0.5
2,202,790	+	yehL	b2119	0.16	+2.4
2,202,840	-	yehL	b2119	0.20	+0.0
2,202,843	-	yehL	b2119	0.21	-0.5