Strain Fitness in Escherichia coli BW25113 around b1890

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,973,279	-				-3.5
1,973,279	-				-2.4
1,973,443	-				+0.2
1,973,443	-				-0.7
1,973,577	-	motB	b1889	0.24	-1.6
1,973,595	-	motB	b1889	0.26	-3.1
1,973,697	+	motB	b1889	0.37	-4.8
1,973,846	-	motB	b1889	0.53	-2.6
1,973,850	-	motB	b1889	0.54	-2.1
1,974,089	-	motB	b1889	0.79	-2.7
1,974,089	-	motB	b1889	0.79	-2.4
1,974,197	+				-3.8
1,974,226	+				-2.3
1,974,233	+				-0.6
1,974,233	+				-2.0
1,974,414	+	motA	b1890	0.16	-2.1
1,974,854	-	motA	b1890	0.65	-2.6
1,974,934	+	motA	b1890	0.74	-2.5
1,974,934	+	motA	b1890	0.74	-4.5
1,975,040	+	motA	b1890	0.86	+0.9
1,975,092	+				-0.5
1,975,093	-				-2.4
1,975,173	+				-2.9
1,975,179	+				-2.5
1,975,179	+				-1.9
1,975,415	-	flhC	b1891	0.22	-3.5
1,975,477	+	flhC	b1891	0.32	+0.1
1,975,589	+	flhC	b1891	0.52	+0.2
1,975,636	+	flhC	b1891	0.60	-3.1
1,975,707	+	flhC	b1891	0.72	+0.3
1,975,914	-	flhD	b1892	0.12	-0.1
1,975,961	-	flhD	b1892	0.26	-2.6
1,975,961	-	flhD	b1892	0.26	-2.9
1,975,991	+	flhD	b1892	0.34	-2.1
1,975,991	-	flhD	b1892	0.34	-4.0
1,976,072	+	flhD	b1892	0.57	+0.6
1,976,072	+	flhD	b1892	0.57	-2.6
1,976,072	+	flhD	b1892	0.57	-2.1
1,976,120	+	flhD	b1892	0.71	-0.4
1,976,120	+	flhD	b1892	0.71	-2.6
1,976,138	+	flhD	b1892	0.76	-2.9
1,976,146	-	flhD	b1892	0.78	-1.9
1,976,149	-	flhD	b1892	0.79	-2.5
1,976,149	-	flhD	b1892	0.79	-2.6