Strain Fitness in Escherichia coli BW25113 around b2664

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,792,735	+	gabP	b2663	0.33	-1.1
2,792,735	+	gabP	b2663	0.33	+1.0
2,792,791	-	gabP	b2663	0.37	+2.0
2,792,815	+	gabP	b2663	0.39	-0.2
2,792,815	+	gabP	b2663	0.39	-1.1
2,792,815	+	gabP	b2663	0.39	+0.0
2,792,821	-	gabP	b2663	0.39	-0.3
2,792,839	+	gabP	b2663	0.40	+0.3
2,792,839	+	gabP	b2663	0.40	-0.7
2,792,849	+	gabP	b2663	0.41	+0.3
2,792,881	+	gabP	b2663	0.43	+0.9
2,792,884	-	gabP	b2663	0.43	+1.1
2,792,889	-	gabP	b2663	0.44	-0.8
2,792,901	-	gabP	b2663	0.45	-0.0
2,792,926	+	gabP	b2663	0.46	-1.2
2,792,995	-	gabP	b2663	0.51	+1.4
2,793,010	-	gabP	b2663	0.52	+0.2
2,793,010	-	gabP	b2663	0.52	+1.1
2,793,065	+	gabP	b2663	0.56	-2.9
2,793,081	+	gabP	b2663	0.58	+1.0
2,793,094	-	gabP	b2663	0.58	+1.4
2,793,100	+	gabP	b2663	0.59	+0.0
2,793,100	+	gabP	b2663	0.59	+0.3
2,793,100	+	gabP	b2663	0.59	+0.8
2,793,100	+	gabP	b2663	0.59	+1.2
2,793,100	+	gabP	b2663	0.59	+2.1
2,793,100	+	gabP	b2663	0.59	-1.7
2,793,100	+	gabP	b2663	0.59	+1.1
2,793,100	+	gabP	b2663	0.59	+0.6
2,793,100	+	gabP	b2663	0.59	+0.5
2,793,108	-	gabP	b2663	0.59	+1.2
2,793,108	-	gabP	b2663	0.59	+1.2
2,793,108	-	gabP	b2663	0.59	+2.1
2,793,108	-	gabP	b2663	0.59	-0.8
2,793,108	-	gabP	b2663	0.59	-0.6
2,793,108	-	gabP	b2663	0.59	+2.0
2,793,108	-	gabP	b2663	0.59	+0.6
2,793,130	+	gabP	b2663	0.61	-0.3
2,793,130	+	gabP	b2663	0.61	-2.2
2,793,144	+	gabP	b2663	0.62	-1.0
2,793,159	-	gabP	b2663	0.63	+0.0
2,793,159	-	gabP	b2663	0.63	+1.5
2,793,182	-	gabP	b2663	0.65	+0.3
2,793,184	+	gabP	b2663	0.65	+1.5
2,793,186	+	gabP	b2663	0.65	-2.4
2,793,186	+				+1.8
2,793,186	+	gabP	b2663	0.65	+0.9
2,793,186	+	gabP	b2663	0.65	+1.4
2,793,187	-	gabP	b2663	0.65	-2.5
2,793,189	+	gabP	b2663	0.65	-1.2
2,793,189	+	gabP	b2663	0.65	+0.3
2,793,192	-	gabP	b2663	0.65	+0.1
2,793,192	-	gabP	b2663	0.65	+0.5
2,793,194	-	gabP	b2663	0.66	-1.1
2,793,194	-	gabP	b2663	0.66	+1.0
2,793,194	-	gabP	b2663	0.66	+1.2
2,793,195	-	gabP	b2663	0.66	+0.7
2,793,197	-	gabP	b2663	0.66	-0.7
2,793,197	-	gabP	b2663	0.66	+1.0
2,793,197	-	gabP	b2663	0.66	+0.8
2,793,197	-	gabP	b2663	0.66	+1.7
2,793,197	-	gabP	b2663	0.66	+2.9
2,793,197	-	gabP	b2663	0.66	-0.6
2,793,215	+	gabP	b2663	0.67	+1.0
2,793,254	+	gabP	b2663	0.70	+0.2
2,793,254	+	gabP	b2663	0.70	-0.1
2,793,266	+	gabP	b2663	0.71	-0.2
2,793,286	+	gabP	b2663	0.72	-0.7
2,793,286	+	gabP	b2663	0.72	+2.7
2,793,292	-	gabP	b2663	0.73	+1.0
2,793,292	-	gabP	b2663	0.73	-1.6
2,793,294	-	gabP	b2663	0.73	-0.1
2,793,294	-	gabP	b2663	0.73	-0.1
2,793,296	+	gabP	b2663	0.73	+0.7
2,793,304	+	gabP	b2663	0.73	+1.4
2,793,312	+	gabP	b2663	0.74	+1.2
2,793,315	-	gabP	b2663	0.74	-1.7
2,793,319	-	gabP	b2663	0.75	-0.1
2,793,330	+	gabP	b2663	0.75	+0.3
2,793,330	+	gabP	b2663	0.75	+0.8
2,793,330	-	gabP	b2663	0.75	-0.4
2,793,358	+	gabP	b2663	0.77	+1.3
2,793,379	+	gabP	b2663	0.79	-1.4
2,793,379	+	gabP	b2663	0.79	+1.1
2,793,387	-	gabP	b2663	0.79	+0.3
2,793,388	-	gabP	b2663	0.79	-0.5
2,793,388	-	gabP	b2663	0.79	-0.6
2,793,451	-	gabP	b2663	0.84	-0.1
2,793,487	+	gabP	b2663	0.87	-0.4
2,793,488	+	gabP	b2663	0.87	-1.1
2,793,490	-	gabP	b2663	0.87	-1.8
2,793,490	-	gabP	b2663	0.87	+1.4
2,793,491	-	gabP	b2663	0.87	-0.6
2,793,500	-	gabP	b2663	0.87	-0.9
2,793,502	-	gabP	b2663	0.88	+1.8
2,793,523	+	gabP	b2663	0.89	-0.4
2,793,535	+	gabP	b2663	0.90	-0.4
2,793,543	-				+0.5
2,793,543	-				+0.2
2,793,543	-				-0.6
2,793,557	+				+3.2
2,793,557	+				-1.0
2,793,565	+				+0.9
2,793,565	+				+0.9
2,793,605	-				+1.1
2,793,605	-				-1.3
2,793,605	-				-1.9
2,793,605	-				+1.1
2,793,605	-				+0.7
2,793,605	-				+1.0
2,793,663	+				-2.4
2,793,674	+				-0.9
2,793,674	+				-0.1
2,793,674	+				+0.9
2,793,680	+				+0.4
2,793,683	-				+0.8
2,793,686	+				+1.7
2,793,692	+				-0.5
2,793,694	-				+1.2
2,793,694	-				-0.4
2,793,699	+				+0.4
2,793,700	-				+0.9
2,793,716	-				-1.8
2,793,716	-				+0.8
2,793,725	-				+2.1
2,793,811	+	ygaE	b2664	0.17	+1.0
2,793,829	-	ygaE	b2664	0.20	+2.3
2,793,829	-	ygaE	b2664	0.20	+1.2
2,793,846	+	ygaE	b2664	0.23	+1.6
2,793,871	-				+2.9
2,793,906	+	ygaE	b2664	0.32	-0.9
2,793,906	+	ygaE	b2664	0.32	-2.1
2,793,954	+	ygaE	b2664	0.39	+0.2
2,793,990	+	ygaE	b2664	0.44	-1.8
2,794,041	-	ygaE	b2664	0.52	+2.2
2,794,085	-				+3.9
2,794,085	-				+1.3
2,794,239	+	ygaE	b2664	0.82	+1.0
2,794,239	+	ygaE	b2664	0.82	-2.4
2,794,271	+	ygaE	b2664	0.87	+0.7
2,794,299	+				-0.4
2,794,372	-				-0.4
2,794,372	-				-1.1
2,794,418	-	ygaU	b2665	0.13	-2.3
2,794,462	+	ygaU	b2665	0.23	+1.5
2,794,469	-	ygaU	b2665	0.24	-0.1
2,794,480	-	ygaU	b2665	0.27	-1.4
2,794,518	-	ygaU	b2665	0.35	-2.0
2,794,554	+	ygaU	b2665	0.43	-3.0
2,794,554	+	ygaU	b2665	0.43	-2.9
2,794,562	-	ygaU	b2665	0.45	-0.5
2,794,623	-	ygaU	b2665	0.59	+1.1
2,794,623	-	ygaU	b2665	0.59	-1.7
2,794,628	+	ygaU	b2665	0.60	-0.8
2,794,712	+	ygaU	b2665	0.78	+0.4
2,794,758	-	ygaU	b2665	0.89	-2.0
2,794,758	-	ygaU	b2665	0.89	-0.1
2,794,808	+				+1.0
2,794,812	-				+0.7
2,794,835	-				-0.5
2,794,835	-				-0.5
2,794,851	+				+0.0
2,794,851	+				-0.9
2,794,877	+				-1.3
2,794,880	-				-1.4
2,794,880	-				-0.4
2,794,887	-				-1.4
2,794,887	-				-1.2
2,794,892	-				-2.0
2,794,892	-				+1.1
2,794,985	+	yqaE	b2666	0.58	-2.6
2,794,987	-	yqaE	b2666	0.60	+0.1
2,794,997	+	yqaE	b2666	0.66	-0.8
2,794,997	-	yqaE	b2666	0.66	-0.8
2,795,054	-				+0.8
2,795,054	-				-1.3
2,795,066	-				+0.5
2,795,066	-				+0.3
2,795,154	-				-0.4
2,795,289	-	ygaV	b2667	0.19	-0.0
2,795,295	+	ygaV	b2667	0.21	+0.5
2,795,330	-	ygaV	b2667	0.32	-0.3