Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF431 and GFF432 are separated by 2 nucleotides GFF432 and GFF433 are separated by 138 nucleotides GFF433 and GFF434 are separated by 23 nucleotides GFF434 and GFF435 are separated by 11 nucleotides
GFF431 - 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN, at 153,117 to 154,394
GFF431
GFF432 - 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM, at 154,397 to 154,870
GFF432
GFF433 - Putative chemotaxis protein, resembles cheA, at 155,009 to 155,941
GFF433
GFF434 - hypothetical protein, at 155,965 to 156,429
GFF434
GFF435 - 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130), at 156,441 to 157,439
GFF435
Position (kb) 155
156 Strain fitness (log2 ratio) -1
0
1 at 154.228 kb on - strand, within GFF431 at 154.287 kb on - strand at 154.342 kb on - strand at 154.380 kb on + strand at 154.381 kb on - strand at 154.399 kb on - strand at 154.443 kb on - strand at 154.504 kb on + strand, within GFF432 at 154.505 kb on - strand, within GFF432 at 154.506 kb on + strand, within GFF432 at 154.507 kb on - strand, within GFF432 at 154.507 kb on - strand, within GFF432 at 154.507 kb on - strand, within GFF432 at 154.586 kb on + strand, within GFF432 at 154.808 kb on - strand, within GFF432 at 155.230 kb on - strand, within GFF433 at 155.320 kb on + strand, within GFF433 at 155.353 kb on + strand, within GFF433 at 155.366 kb on + strand, within GFF433 at 155.366 kb on + strand, within GFF433 at 155.367 kb on - strand, within GFF433 at 155.367 kb on - strand, within GFF433 at 155.383 kb on + strand, within GFF433 at 155.499 kb on - strand, within GFF433 at 155.622 kb on + strand, within GFF433 at 155.921 kb on - strand at 155.933 kb on - strand at 156.351 kb on + strand, within GFF434 at 156.376 kb on + strand, within GFF434 at 156.414 kb on + strand at 156.442 kb on + strand at 156.642 kb on + strand, within GFF435 at 156.643 kb on - strand, within GFF435 at 156.643 kb on - strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.924 kb on - strand, within GFF435 at 156.927 kb on + strand, within GFF435 at 156.927 kb on + strand, within GFF435
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 154,228 - GFF431 0.87 +0.3 154,287 - -0.2 154,342 - +0.2 154,380 + +0.1 154,381 - +0.2 154,399 - +0.3 154,443 - +0.2 154,504 + GFF432 0.23 +0.1 154,505 - GFF432 0.23 -1.2 154,506 + GFF432 0.23 +0.3 154,507 - GFF432 0.23 +0.2 154,507 - GFF432 0.23 +0.1 154,507 - GFF432 0.23 +0.1 154,586 + GFF432 0.40 +0.8 154,808 - GFF432 0.87 -0.1 155,230 - GFF433 0.24 +1.2 155,320 + GFF433 0.33 +0.9 155,353 + GFF433 0.37 +0.4 155,366 + GFF433 0.38 +0.2 155,366 + GFF433 0.38 -0.3 155,367 - GFF433 0.38 +0.1 155,367 - GFF433 0.38 -0.2 155,383 + GFF433 0.40 +0.5 155,499 - GFF433 0.53 +0.9 155,622 + GFF433 0.66 +0.0 155,921 - -0.4 155,933 - +0.2 156,351 + GFF434 0.83 -0.1 156,376 + GFF434 0.88 +0.0 156,414 + -0.1 156,442 + -0.0 156,642 + GFF435 0.20 -0.2 156,643 - GFF435 0.20 -1.0 156,643 - GFF435 0.20 -0.9 156,923 + GFF435 0.48 -0.1 156,923 + GFF435 0.48 -0.3 156,923 + GFF435 0.48 -0.8 156,924 - GFF435 0.48 +0.4 156,927 + GFF435 0.49 -0.1 156,927 + GFF435 0.49 -0.1
Or see this region's nucleotide sequence