Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF796 and GFF797 are separated by 291 nucleotides GFF797 and GFF798 are separated by 75 nucleotides GFF798 and GFF799 are separated by 51 nucleotides GFF799 and GFF800 overlap by 14 nucleotides
GFF796 - Phage outer membrane lytic protein Rz; Endopeptidase (EC 3.4.-.-), at 144,834 to 145,319
GFF796
GFF797 - hypothetical protein, at 145,611 to 145,802
GFF797
GFF798 - FIG01046582: hypothetical protein, at 145,878 to 146,102
GFF798
GFF799 - FIG01045807: hypothetical protein, at 146,154 to 146,645
GFF799
GFF800 - Phage terminase, large subunit, at 146,632 to 148,740
GFF800
Position (kb)
146
147 Strain fitness (log2 ratio)
-1
0
1 at 145.293 kb on + strand at 145.354 kb on + strand at 145.422 kb on + strand at 145.454 kb on - strand at 145.531 kb on + strand at 145.545 kb on - strand at 145.594 kb on - strand at 145.598 kb on + strand at 145.599 kb on - strand at 145.788 kb on - strand at 145.861 kb on - strand at 145.879 kb on + strand at 145.913 kb on - strand, within GFF798 at 145.929 kb on - strand, within GFF798 at 146.290 kb on - strand, within GFF799 at 146.290 kb on - strand, within GFF799 at 146.503 kb on + strand, within GFF799 at 146.597 kb on - strand at 146.602 kb on + strand at 146.602 kb on + strand at 146.606 kb on + strand at 146.615 kb on - strand at 146.647 kb on + strand at 146.647 kb on + strand at 146.736 kb on + strand at 146.737 kb on - strand at 146.815 kb on - strand at 146.815 kb on - strand at 146.834 kb on - strand at 147.157 kb on + strand, within GFF800 at 147.231 kb on + strand, within GFF800 at 147.231 kb on + strand, within GFF800 at 147.231 kb on + strand, within GFF800 at 147.231 kb on + strand, within GFF800 at 147.232 kb on - strand, within GFF800 at 147.345 kb on - strand, within GFF800 at 147.347 kb on - strand, within GFF800
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 145,293 + -0.0 145,354 + +0.9 145,422 + +0.7 145,454 - +0.3 145,531 + +1.4 145,545 - +0.0 145,594 - +1.3 145,598 + +0.1 145,599 - +0.5 145,788 - +0.8 145,861 - +0.4 145,879 + +0.5 145,913 - GFF798 0.16 +0.5 145,929 - GFF798 0.23 +1.4 146,290 - GFF799 0.28 +0.7 146,290 - GFF799 0.28 +0.6 146,503 + GFF799 0.71 +0.5 146,597 - -1.6 146,602 + +1.6 146,602 + +1.4 146,606 + +1.1 146,615 - +1.5 146,647 + +0.3 146,647 + +0.9 146,736 + +0.7 146,737 - +0.2 146,815 - +0.6 146,815 - +0.6 146,834 - +0.8 147,157 + GFF800 0.25 +0.6 147,231 + GFF800 0.28 -1.3 147,231 + GFF800 0.28 +1.0 147,231 + GFF800 0.28 +1.2 147,231 + GFF800 0.28 +0.3 147,232 - GFF800 0.28 +0.7 147,345 - GFF800 0.34 +0.4 147,347 - GFF800 0.34 +1.5
Or see this region's nucleotide sequence