Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2442 and GFF2443 are separated by 0 nucleotides GFF2443 and GFF2444 overlap by 10 nucleotides GFF2444 and GFF2445 are separated by 95 nucleotides
GFF2442 - Anaerobic sulfite reductase subunit C (EC 1.8.1.-), at 56,804 to 57,817
GFF2442
GFF2443 - putative membrane protein, at 57,818 to 58,804
GFF2443
GFF2444 - FIG00923183: possible membrane protein YebY, at 58,795 to 59,463
GFF2444
GFF2445 - Stationary phase inducible protein CsiE, at 59,559 to 60,836
GFF2445
Position (kb) 58
59
60 Strain fitness (log2 ratio) -1
0
1 at 57.942 kb on - strand, within GFF2443 at 58.015 kb on + strand, within GFF2443 at 58.249 kb on + strand, within GFF2443 at 58.270 kb on + strand, within GFF2443 at 58.270 kb on + strand, within GFF2443 at 58.275 kb on - strand, within GFF2443 at 58.342 kb on - strand, within GFF2443 at 58.401 kb on - strand, within GFF2443 at 58.739 kb on + strand at 58.833 kb on + strand at 58.918 kb on - strand, within GFF2444 at 58.919 kb on + strand, within GFF2444 at 58.920 kb on - strand, within GFF2444 at 58.982 kb on + strand, within GFF2444 at 58.998 kb on - strand, within GFF2444 at 59.000 kb on + strand, within GFF2444 at 59.027 kb on + strand, within GFF2444 at 59.027 kb on + strand, within GFF2444 at 59.027 kb on + strand, within GFF2444 at 59.028 kb on - strand, within GFF2444 at 59.028 kb on - strand, within GFF2444 at 59.166 kb on + strand, within GFF2444 at 59.186 kb on - strand, within GFF2444 at 59.221 kb on + strand, within GFF2444 at 59.302 kb on + strand, within GFF2444 at 59.482 kb on + strand at 59.676 kb on - strand at 59.694 kb on - strand, within GFF2445 at 59.822 kb on - strand, within GFF2445 at 59.848 kb on + strand, within GFF2445 at 59.936 kb on + strand, within GFF2445 at 60.031 kb on - strand, within GFF2445 at 60.041 kb on - strand, within GFF2445 at 60.189 kb on - strand, within GFF2445 at 60.335 kb on + strand, within GFF2445 at 60.348 kb on + strand, within GFF2445 at 60.348 kb on + strand, within GFF2445 at 60.349 kb on - strand, within GFF2445 at 60.349 kb on - strand, within GFF2445 at 60.383 kb on - strand, within GFF2445 at 60.383 kb on - strand, within GFF2445 at 60.405 kb on - strand, within GFF2445
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 57,942 - GFF2443 0.13 +0.3 58,015 + GFF2443 0.20 +0.1 58,249 + GFF2443 0.44 -0.4 58,270 + GFF2443 0.46 -0.1 58,270 + GFF2443 0.46 -0.3 58,275 - GFF2443 0.46 +0.1 58,342 - GFF2443 0.53 -0.0 58,401 - GFF2443 0.59 -0.5 58,739 + -0.5 58,833 + -1.0 58,918 - GFF2444 0.18 -0.6 58,919 + GFF2444 0.19 -0.6 58,920 - GFF2444 0.19 -0.4 58,982 + GFF2444 0.28 -0.2 58,998 - GFF2444 0.30 -0.4 59,000 + GFF2444 0.31 -0.7 59,027 + GFF2444 0.35 +0.0 59,027 + GFF2444 0.35 -0.3 59,027 + GFF2444 0.35 -0.4 59,028 - GFF2444 0.35 +0.1 59,028 - GFF2444 0.35 +0.4 59,166 + GFF2444 0.55 +0.1 59,186 - GFF2444 0.58 +0.1 59,221 + GFF2444 0.64 +0.2 59,302 + GFF2444 0.76 +0.0 59,482 + +0.1 59,676 - -0.7 59,694 - GFF2445 0.11 +0.2 59,822 - GFF2445 0.21 -0.2 59,848 + GFF2445 0.23 -0.4 59,936 + GFF2445 0.29 -0.1 60,031 - GFF2445 0.37 +0.1 60,041 - GFF2445 0.38 -0.1 60,189 - GFF2445 0.49 -1.6 60,335 + GFF2445 0.61 -0.7 60,348 + GFF2445 0.62 -0.1 60,348 + GFF2445 0.62 -0.4 60,349 - GFF2445 0.62 -0.3 60,349 - GFF2445 0.62 -0.3 60,383 - GFF2445 0.64 +0.3 60,383 - GFF2445 0.64 +0.4 60,405 - GFF2445 0.66 -0.2
Or see this region's nucleotide sequence