Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1527 and GFF1528 are separated by 197 nucleotides GFF1528 and GFF1529 overlap by 14 nucleotides
GFF1527 - Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144), at 30,458 to 31,729
GFF1527
GFF1528 - PTS system, tagatose-specific IIA-TPr component (EC 2.7.1.69), at 31,927 to 32,733
GFF1528
GFF1529 - PTS system, galactose-inducible IIB component (EC 2.7.1.69) / PTS system, galactose-inducible IIC component (EC 2.7.1.69), at 32,720 to 34,147
GFF1529
Position (kb)
31
32
33 Strain fitness (log2 ratio)
-1
0
1 at 31.033 kb on + strand, within GFF1527 at 31.234 kb on - strand, within GFF1527 at 31.234 kb on - strand, within GFF1527 at 31.392 kb on + strand, within GFF1527 at 31.400 kb on + strand, within GFF1527 at 31.403 kb on + strand, within GFF1527 at 31.456 kb on + strand, within GFF1527 at 31.457 kb on - strand, within GFF1527 at 31.464 kb on - strand, within GFF1527 at 31.857 kb on - strand at 32.044 kb on + strand, within GFF1528 at 32.044 kb on + strand, within GFF1528 at 32.044 kb on + strand, within GFF1528 at 32.175 kb on + strand, within GFF1528 at 32.200 kb on - strand, within GFF1528 at 32.234 kb on - strand, within GFF1528 at 32.356 kb on - strand, within GFF1528 at 32.373 kb on + strand, within GFF1528 at 32.457 kb on - strand, within GFF1528 at 32.509 kb on + strand, within GFF1528 at 32.509 kb on + strand, within GFF1528 at 32.621 kb on + strand, within GFF1528 at 32.842 kb on + strand at 32.846 kb on + strand at 32.847 kb on - strand at 32.847 kb on - strand at 32.880 kb on - strand, within GFF1529 at 32.885 kb on + strand, within GFF1529 at 32.885 kb on + strand, within GFF1529 at 32.933 kb on - strand, within GFF1529 at 32.933 kb on - strand, within GFF1529 at 32.937 kb on - strand, within GFF1529 at 33.028 kb on + strand, within GFF1529 at 33.028 kb on + strand, within GFF1529 at 33.042 kb on + strand, within GFF1529 at 33.042 kb on + strand, within GFF1529 at 33.042 kb on + strand, within GFF1529 at 33.043 kb on - strand, within GFF1529 at 33.043 kb on - strand, within GFF1529 at 33.043 kb on - strand, within GFF1529 at 33.114 kb on - strand, within GFF1529 at 33.155 kb on - strand, within GFF1529 at 33.160 kb on - strand, within GFF1529 at 33.266 kb on + strand, within GFF1529 at 33.314 kb on - strand, within GFF1529 at 33.411 kb on + strand, within GFF1529 at 33.522 kb on - strand, within GFF1529
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 31,033 + GFF1527 0.45 +0.2 31,234 - GFF1527 0.61 -0.2 31,234 - GFF1527 0.61 -0.4 31,392 + GFF1527 0.73 -0.4 31,400 + GFF1527 0.74 -1.0 31,403 + GFF1527 0.74 +1.1 31,456 + GFF1527 0.78 -0.1 31,457 - GFF1527 0.79 -0.2 31,464 - GFF1527 0.79 -0.5 31,857 - -0.0 32,044 + GFF1528 0.14 +0.5 32,044 + GFF1528 0.14 +0.1 32,044 + GFF1528 0.14 -0.6 32,175 + GFF1528 0.31 +0.1 32,200 - GFF1528 0.34 -0.6 32,234 - GFF1528 0.38 +0.0 32,356 - GFF1528 0.53 +0.7 32,373 + GFF1528 0.55 +0.4 32,457 - GFF1528 0.66 +0.1 32,509 + GFF1528 0.72 +0.1 32,509 + GFF1528 0.72 +0.2 32,621 + GFF1528 0.86 +0.4 32,842 + -0.4 32,846 + +0.1 32,847 - +0.0 32,847 - +0.1 32,880 - GFF1529 0.11 +0.4 32,885 + GFF1529 0.12 +0.2 32,885 + GFF1529 0.12 -0.0 32,933 - GFF1529 0.15 +0.2 32,933 - GFF1529 0.15 +0.0 32,937 - GFF1529 0.15 +0.3 33,028 + GFF1529 0.22 +0.4 33,028 + GFF1529 0.22 -0.1 33,042 + GFF1529 0.23 -0.8 33,042 + GFF1529 0.23 -0.3 33,042 + GFF1529 0.23 +0.1 33,043 - GFF1529 0.23 +0.1 33,043 - GFF1529 0.23 -0.5 33,043 - GFF1529 0.23 +0.0 33,114 - GFF1529 0.28 -0.3 33,155 - GFF1529 0.30 +0.2 33,160 - GFF1529 0.31 +0.0 33,266 + GFF1529 0.38 -0.6 33,314 - GFF1529 0.42 +0.3 33,411 + GFF1529 0.48 +0.1 33,522 - GFF1529 0.56 +0.8
Or see this region's nucleotide sequence