Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF717 and GFF718 are separated by 455 nucleotides GFF718 and GFF719 are separated by 28 nucleotides GFF719 and GFF720 are separated by 393 nucleotides
GFF717 - Putative ATPase component of ABC transporter with duplicated ATPase domain, at 72,100 to 73,692
GFF717
GFF718 - putative inner membrane protein, at 74,148 to 75,044
GFF718
GFF719 - HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217), at 75,073 to 75,603
GFF719
GFF720 - FIG01046262: hypothetical protein, at 75,997 to 77,262
GFF720
Position (kb) 74
75
76 Strain fitness (log2 ratio) -1
0
1 at 73.258 kb on + strand, within GFF717 at 73.276 kb on + strand, within GFF717 at 73.276 kb on + strand, within GFF717 at 73.359 kb on + strand, within GFF717 at 73.359 kb on + strand, within GFF717 at 73.377 kb on - strand, within GFF717 at 73.377 kb on - strand, within GFF717 at 73.392 kb on + strand, within GFF717 at 73.690 kb on + strand at 73.777 kb on + strand at 73.781 kb on + strand at 74.679 kb on - strand, within GFF718 at 74.778 kb on + strand, within GFF718 at 74.778 kb on + strand, within GFF718 at 74.779 kb on - strand, within GFF718 at 74.779 kb on - strand, within GFF718 at 75.138 kb on + strand, within GFF719 at 75.139 kb on - strand, within GFF719 at 75.373 kb on - strand, within GFF719 at 75.552 kb on - strand at 75.615 kb on + strand at 75.744 kb on - strand at 75.746 kb on + strand at 75.746 kb on + strand at 75.846 kb on + strand at 75.911 kb on + strand at 76.007 kb on - strand at 76.007 kb on - strand at 76.012 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 73,258 + GFF717 0.73 -0.5 73,276 + GFF717 0.74 -0.1 73,276 + GFF717 0.74 +0.2 73,359 + GFF717 0.79 +0.3 73,359 + GFF717 0.79 +0.0 73,377 - GFF717 0.80 -0.3 73,377 - GFF717 0.80 -0.1 73,392 + GFF717 0.81 +0.4 73,690 + +0.2 73,777 + +0.1 73,781 + +0.1 74,679 - GFF718 0.59 -1.0 74,778 + GFF718 0.70 -1.6 74,778 + GFF718 0.70 +0.1 74,779 - GFF718 0.70 +0.1 74,779 - GFF718 0.70 -0.7 75,138 + GFF719 0.12 +0.1 75,139 - GFF719 0.12 -0.2 75,373 - GFF719 0.56 +0.7 75,552 - -0.4 75,615 + -0.3 75,744 - +0.3 75,746 + -0.5 75,746 + +0.2 75,846 + -0.2 75,911 + -1.0 76,007 - +0.2 76,007 - -0.1 76,012 + -0.1
Or see this region's nucleotide sequence