Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4366 and GFF4367 are separated by 212 nucleotides GFF4367 and GFF4368 are separated by 31 nucleotides
GFF4366 - putative multidrug transporter membrane ATP-binding components, at 148,744 to 150,525
GFF4366
GFF4367 - Nitrogen regulatory protein P-II, glnK, at 150,738 to 151,076
GFF4367
GFF4368 - Ammonium transporter, at 151,108 to 152,394
GFF4368
Position (kb) 150
151
152 Strain fitness (log2 ratio) -1
0
1 at 149.769 kb on + strand, within GFF4366 at 149.770 kb on - strand, within GFF4366 at 149.828 kb on + strand, within GFF4366 at 149.912 kb on - strand, within GFF4366 at 149.912 kb on - strand, within GFF4366 at 149.912 kb on - strand, within GFF4366 at 150.145 kb on - strand, within GFF4366 at 150.234 kb on - strand, within GFF4366 at 150.615 kb on + strand at 150.616 kb on - strand at 150.616 kb on - strand at 150.717 kb on + strand at 150.737 kb on + strand at 150.738 kb on - strand at 150.738 kb on - strand at 150.888 kb on + strand, within GFF4367 at 150.982 kb on - strand, within GFF4367 at 150.982 kb on - strand, within GFF4367 at 151.341 kb on + strand, within GFF4368 at 151.342 kb on - strand, within GFF4368 at 151.459 kb on + strand, within GFF4368 at 151.467 kb on + strand, within GFF4368 at 151.592 kb on - strand, within GFF4368 at 151.592 kb on - strand, within GFF4368 at 151.592 kb on - strand, within GFF4368 at 151.666 kb on - strand, within GFF4368 at 151.716 kb on - strand, within GFF4368 at 151.716 kb on - strand, within GFF4368 at 151.929 kb on - strand, within GFF4368 at 151.929 kb on - strand, within GFF4368 at 152.005 kb on + strand, within GFF4368
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 149,769 + GFF4366 0.58 -0.3 149,770 - GFF4366 0.58 +1.6 149,828 + GFF4366 0.61 +1.0 149,912 - GFF4366 0.66 +0.4 149,912 - GFF4366 0.66 +0.4 149,912 - GFF4366 0.66 +0.2 150,145 - GFF4366 0.79 +0.3 150,234 - GFF4366 0.84 +1.0 150,615 + +0.4 150,616 - +0.2 150,616 - -0.1 150,717 + -0.1 150,737 + +1.7 150,738 - +0.2 150,738 - -0.7 150,888 + GFF4367 0.44 -0.2 150,982 - GFF4367 0.72 +0.1 150,982 - GFF4367 0.72 -0.6 151,341 + GFF4368 0.18 +0.6 151,342 - GFF4368 0.18 -0.5 151,459 + GFF4368 0.27 +0.1 151,467 + GFF4368 0.28 +0.3 151,592 - GFF4368 0.38 -0.8 151,592 - GFF4368 0.38 -0.4 151,592 - GFF4368 0.38 -0.8 151,666 - GFF4368 0.43 -0.4 151,716 - GFF4368 0.47 -0.3 151,716 - GFF4368 0.47 -0.0 151,929 - GFF4368 0.64 +1.6 151,929 - GFF4368 0.64 +0.2 152,005 + GFF4368 0.70 -0.6
Or see this region's nucleotide sequence