Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2832 and GFF2833 are separated by 12 nucleotides GFF2833 and GFF2834 are separated by 57 nucleotides GFF2834 and GFF2835 are separated by 397 nucleotides GFF2835 and GFF2836 overlap by 4 nucleotides
GFF2832 - PTS system, mannose-specific IIC component (EC 2.7.1.69), at 354,826 to 355,626
GFF2832
GFF2833 - PTS system, mannose-specific IID component (EC 2.7.1.69), at 355,639 to 356,490
GFF2833
GFF2834 - FIG00510464: hypothetical protein, at 356,548 to 357,018
GFF2834
GFF2835 - Putative membrane protein, at 357,416 to 357,982
GFF2835
GFF2836 - Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51), at 357,979 to 358,788
GFF2836
Position (kb) 356
357
358 Strain fitness (log2 ratio) -1
0
1
2 at 355.747 kb on - strand, within GFF2833 at 355.867 kb on + strand, within GFF2833 at 356.391 kb on + strand, within GFF2833 at 356.416 kb on - strand at 356.500 kb on - strand at 356.692 kb on - strand, within GFF2834 at 356.719 kb on - strand, within GFF2834 at 356.724 kb on + strand, within GFF2834 at 356.799 kb on - strand, within GFF2834 at 357.424 kb on + strand at 357.424 kb on + strand at 357.425 kb on - strand at 357.431 kb on - strand at 357.602 kb on - strand, within GFF2835 at 357.691 kb on + strand, within GFF2835 at 357.735 kb on + strand, within GFF2835 at 357.738 kb on + strand, within GFF2835 at 357.807 kb on + strand, within GFF2835 at 357.828 kb on + strand, within GFF2835 at 357.828 kb on + strand, within GFF2835 at 357.828 kb on + strand, within GFF2835 at 357.829 kb on - strand, within GFF2835 at 357.832 kb on + strand, within GFF2835 at 357.864 kb on + strand, within GFF2835
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 355,747 - GFF2833 0.13 -0.0 355,867 + GFF2833 0.27 -0.5 356,391 + GFF2833 0.88 -0.2 356,416 - -0.8 356,500 - -0.7 356,692 - GFF2834 0.31 -1.5 356,719 - GFF2834 0.36 +0.2 356,724 + GFF2834 0.37 -1.6 356,799 - GFF2834 0.53 -0.2 357,424 + +0.2 357,424 + +0.5 357,425 - -1.5 357,431 - -0.8 357,602 - GFF2835 0.33 -0.0 357,691 + GFF2835 0.49 +0.2 357,735 + GFF2835 0.56 +0.2 357,738 + GFF2835 0.57 -0.0 357,807 + GFF2835 0.69 -0.1 357,828 + GFF2835 0.73 +1.8 357,828 + GFF2835 0.73 +0.7 357,828 + GFF2835 0.73 -1.2 357,829 - GFF2835 0.73 -0.5 357,832 + GFF2835 0.73 +1.3 357,864 + GFF2835 0.79 +0.2
Or see this region's nucleotide sequence