Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2662 and GFF2663 are separated by 105 nucleotides GFF2663 and GFF2664 are separated by 137 nucleotides GFF2664 and GFF2665 are separated by 26 nucleotides
GFF2662 - FIG01045240: hypothetical protein, at 184,981 to 185,205
GFF2662
GFF2663 - Thiol peroxidase, Tpx-type (EC 1.11.1.15), at 185,311 to 185,829
GFF2663
GFF2664 - FIG01200701: possible membrane protein, at 185,967 to 186,791
GFF2664
GFF2665 - Invasin-like protein, at 186,818 to 188,800
GFF2665
Position (kb) 185
186
187 Strain fitness (log2 ratio) -1
0
1 at 185.215 kb on - strand at 185.334 kb on + strand at 185.350 kb on - strand at 185.384 kb on - strand, within GFF2663 at 185.543 kb on + strand, within GFF2663 at 186.169 kb on - strand, within GFF2664 at 186.448 kb on - strand, within GFF2664 at 186.767 kb on - strand at 186.792 kb on - strand at 187.079 kb on - strand, within GFF2665 at 187.147 kb on + strand, within GFF2665 at 187.166 kb on + strand, within GFF2665 at 187.167 kb on - strand, within GFF2665 at 187.167 kb on - strand, within GFF2665 at 187.170 kb on - strand, within GFF2665 at 187.172 kb on + strand, within GFF2665 at 187.173 kb on - strand, within GFF2665 at 187.173 kb on - strand, within GFF2665 at 187.223 kb on + strand, within GFF2665 at 187.398 kb on + strand, within GFF2665 at 187.398 kb on + strand, within GFF2665 at 187.597 kb on + strand, within GFF2665 at 187.598 kb on - strand, within GFF2665
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 185,215 - -0.3 185,334 + -0.1 185,350 - -0.0 185,384 - GFF2663 0.14 -0.2 185,543 + GFF2663 0.45 -0.4 186,169 - GFF2664 0.24 -1.2 186,448 - GFF2664 0.58 -0.7 186,767 - +0.2 186,792 - +0.0 187,079 - GFF2665 0.13 +0.5 187,147 + GFF2665 0.17 -1.2 187,166 + GFF2665 0.18 +0.4 187,167 - GFF2665 0.18 -0.3 187,167 - GFF2665 0.18 +0.2 187,170 - GFF2665 0.18 -0.1 187,172 + GFF2665 0.18 +0.7 187,173 - GFF2665 0.18 -0.0 187,173 - GFF2665 0.18 -0.3 187,223 + GFF2665 0.20 -0.3 187,398 + GFF2665 0.29 -0.7 187,398 + GFF2665 0.29 +0.3 187,597 + GFF2665 0.39 -0.3 187,598 - GFF2665 0.39 +0.5
Or see this region's nucleotide sequence