Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0426 and PP_0427 are separated by 10 nucleotides PP_0427 and PP_0428 are separated by 65 nucleotides PP_0428 and PP_0429 are separated by 63 nucleotides PP_0429 and PP_0430 are separated by 67 nucleotides
PP_0426: PP_0426 - conserved membrane protein of unknown function, at 514,043 to 515,083
_0426
PP_0427: PP_0427 - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 515,094 to 515,741
_0427
PP_0428: PP_0428 - aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase, at 515,807 to 516,145
_0428
PP_0429: PP_0429 - Oxidoreductase, short chain dehydrogenase/reductase family, at 516,209 to 516,991
_0429
PP_0430: PP_0430 - conserved protein of unknown function, at 517,059 to 518,015
_0430
Position (kb) 515
516
517 Strain fitness (log2 ratio) -2
-1
0
1
2 at 514.837 kb on + strand, within PP_0426 at 514.837 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.839 kb on + strand, within PP_0426 at 514.840 kb on - strand, within PP_0426 at 514.840 kb on - strand, within PP_0426 at 514.840 kb on - strand, within PP_0426 at 514.840 kb on - strand, within PP_0426 at 514.938 kb on + strand, within PP_0426 at 514.938 kb on + strand, within PP_0426 at 514.938 kb on + strand, within PP_0426 at 514.939 kb on - strand, within PP_0426 at 514.939 kb on - strand, within PP_0426 at 514.939 kb on - strand, within PP_0426 at 515.723 kb on - strand at 515.774 kb on + strand at 515.782 kb on + strand at 515.851 kb on + strand, within PP_0428 at 515.851 kb on + strand, within PP_0428 at 515.851 kb on + strand, within PP_0428 at 515.851 kb on + strand, within PP_0428 at 515.851 kb on + strand, within PP_0428 at 515.852 kb on - strand, within PP_0428 at 515.852 kb on - strand, within PP_0428 at 515.852 kb on - strand, within PP_0428 at 515.852 kb on - strand, within PP_0428 at 515.863 kb on - strand, within PP_0428 at 516.090 kb on + strand, within PP_0428 at 516.090 kb on + strand, within PP_0428 at 516.090 kb on + strand, within PP_0428 at 516.090 kb on + strand, within PP_0428 at 516.090 kb on + strand, within PP_0428 at 516.091 kb on - strand, within PP_0428 at 516.091 kb on - strand, within PP_0428 at 516.091 kb on - strand, within PP_0428 at 516.091 kb on - strand, within PP_0428 at 516.097 kb on + strand, within PP_0428 at 516.097 kb on + strand, within PP_0428 at 516.097 kb on + strand, within PP_0428 at 516.097 kb on + strand, within PP_0428 at 516.097 kb on + strand, within PP_0428 at 516.098 kb on - strand, within PP_0428 at 516.098 kb on - strand, within PP_0428 at 516.098 kb on - strand, within PP_0428 at 516.098 kb on - strand, within PP_0428 at 516.098 kb on - strand, within PP_0428 at 516.134 kb on + strand at 516.135 kb on - strand at 516.135 kb on - strand at 516.181 kb on - strand at 516.210 kb on + strand at 516.210 kb on + strand at 516.520 kb on - strand, within PP_0429 at 516.608 kb on + strand, within PP_0429 at 516.608 kb on + strand, within PP_0429 at 516.608 kb on + strand, within PP_0429 at 516.609 kb on - strand, within PP_0429 at 516.714 kb on + strand, within PP_0429 at 516.714 kb on + strand, within PP_0429 at 516.714 kb on + strand, within PP_0429 at 516.714 kb on + strand, within PP_0429 at 516.714 kb on + strand, within PP_0429 at 516.715 kb on - strand, within PP_0429 at 516.715 kb on - strand, within PP_0429 at 516.715 kb on - strand, within PP_0429 at 516.715 kb on - strand, within PP_0429 at 516.776 kb on + strand, within PP_0429 at 516.777 kb on - strand, within PP_0429 at 516.777 kb on - strand, within PP_0429 at 517.022 kb on + strand at 517.022 kb on + strand at 517.023 kb on - strand at 517.027 kb on + strand at 517.027 kb on + strand at 517.028 kb on - strand at 517.028 kb on - strand at 517.028 kb on - strand at 517.028 kb on - strand at 517.060 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 514,837 + PP_0426 0.76 +0.4 514,837 + PP_0426 0.76 -0.6 514,839 + PP_0426 0.76 -0.1 514,839 + PP_0426 0.76 +0.5 514,839 + PP_0426 0.76 +0.5 514,839 + PP_0426 0.76 +1.1 514,839 + PP_0426 0.76 +0.1 514,839 + PP_0426 0.76 +0.0 514,840 - PP_0426 0.77 +0.0 514,840 - PP_0426 0.77 -0.0 514,840 - PP_0426 0.77 -0.3 514,840 - PP_0426 0.77 -0.0 514,938 + PP_0426 0.86 -0.8 514,938 + PP_0426 0.86 +0.6 514,938 + PP_0426 0.86 +0.5 514,939 - PP_0426 0.86 +1.5 514,939 - PP_0426 0.86 -0.7 514,939 - PP_0426 0.86 -0.8 515,723 - +2.1 515,774 + +2.1 515,782 + -0.1 515,851 + PP_0428 0.13 +0.9 515,851 + PP_0428 0.13 -1.3 515,851 + PP_0428 0.13 +1.2 515,851 + PP_0428 0.13 -0.1 515,851 + PP_0428 0.13 +0.5 515,852 - PP_0428 0.13 +0.3 515,852 - PP_0428 0.13 -1.3 515,852 - PP_0428 0.13 -0.4 515,852 - PP_0428 0.13 -0.9 515,863 - PP_0428 0.17 -0.3 516,090 + PP_0428 0.83 +0.9 516,090 + PP_0428 0.83 +1.3 516,090 + PP_0428 0.83 -0.2 516,090 + PP_0428 0.83 -0.5 516,090 + PP_0428 0.83 +0.9 516,091 - PP_0428 0.84 +0.3 516,091 - PP_0428 0.84 +0.1 516,091 - PP_0428 0.84 +1.3 516,091 - PP_0428 0.84 +0.7 516,097 + PP_0428 0.86 +1.5 516,097 + PP_0428 0.86 +0.6 516,097 + PP_0428 0.86 +1.5 516,097 + PP_0428 0.86 +1.3 516,097 + PP_0428 0.86 -2.0 516,098 - PP_0428 0.86 -0.7 516,098 - PP_0428 0.86 +2.5 516,098 - PP_0428 0.86 -0.1 516,098 - PP_0428 0.86 +0.6 516,098 - PP_0428 0.86 -0.1 516,134 + +0.3 516,135 - +0.9 516,135 - +0.1 516,181 - +0.4 516,210 + +1.3 516,210 + -0.5 516,520 - PP_0429 0.40 +0.2 516,608 + PP_0429 0.51 +0.2 516,608 + PP_0429 0.51 +0.4 516,608 + PP_0429 0.51 -0.7 516,609 - PP_0429 0.51 -0.0 516,714 + PP_0429 0.64 +0.5 516,714 + PP_0429 0.64 -0.1 516,714 + PP_0429 0.64 +0.8 516,714 + PP_0429 0.64 +0.1 516,714 + PP_0429 0.64 +0.1 516,715 - PP_0429 0.65 +0.2 516,715 - PP_0429 0.65 +0.3 516,715 - PP_0429 0.65 -0.8 516,715 - PP_0429 0.65 +1.1 516,776 + PP_0429 0.72 +0.1 516,777 - PP_0429 0.73 +0.3 516,777 - PP_0429 0.73 +0.5 517,022 + +1.2 517,022 + +0.5 517,023 - -0.7 517,027 + +0.8 517,027 + -0.6 517,028 - -0.3 517,028 - +0.5 517,028 - +1.1 517,028 - -0.1 517,060 + -1.0
Or see this region's nucleotide sequence