Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF800 and GFF801 overlap by 4 nucleotides GFF801 and GFF802 overlap by 4 nucleotides GFF802 and GFF803 overlap by 38 nucleotides
GFF800 - Phage terminase, large subunit, at 146,632 to 148,740
GFF800
GFF801 - FIG01047026: hypothetical protein, at 148,737 to 148,943
GFF801
GFF802 - Phage portal protein, at 148,940 to 150,475
GFF802
GFF803 - Prophage Clp protease-like protein, at 150,438 to 152,513
GFF803
Position (kb) 148
149
150
151 Strain fitness (log2 ratio) -2
-1
0
1
2 at 147.980 kb on + strand, within GFF800 at 147.980 kb on + strand, within GFF800 at 148.014 kb on - strand, within GFF800 at 148.115 kb on + strand, within GFF800 at 148.251 kb on - strand, within GFF800 at 148.264 kb on + strand, within GFF800 at 148.265 kb on - strand, within GFF800 at 148.396 kb on + strand, within GFF800 at 148.396 kb on + strand, within GFF800 at 148.396 kb on + strand, within GFF800 at 148.447 kb on + strand, within GFF800 at 148.523 kb on - strand, within GFF800 at 148.753 kb on + strand at 148.753 kb on + strand at 148.773 kb on + strand, within GFF801 at 149.024 kb on + strand at 149.024 kb on + strand at 149.090 kb on - strand at 149.543 kb on + strand, within GFF802 at 149.708 kb on + strand, within GFF802 at 149.793 kb on - strand, within GFF802 at 149.812 kb on + strand, within GFF802 at 149.813 kb on - strand, within GFF802 at 150.038 kb on + strand, within GFF802 at 150.062 kb on - strand, within GFF802 at 150.148 kb on + strand, within GFF802 at 150.149 kb on - strand, within GFF802 at 150.238 kb on - strand, within GFF802 at 150.238 kb on - strand, within GFF802 at 150.524 kb on + strand at 150.525 kb on - strand at 150.528 kb on + strand at 150.617 kb on + strand at 150.617 kb on + strand at 150.660 kb on + strand, within GFF803 at 150.699 kb on + strand, within GFF803 at 150.700 kb on - strand, within GFF803 at 150.700 kb on - strand, within GFF803 at 151.077 kb on - strand, within GFF803 at 151.184 kb on + strand, within GFF803 at 151.184 kb on + strand, within GFF803 at 151.447 kb on - strand, within GFF803
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 147,980 + GFF800 0.64 +0.4 147,980 + GFF800 0.64 -0.7 148,014 - GFF800 0.66 -1.6 148,115 + GFF800 0.70 +0.8 148,251 - GFF800 0.77 -0.9 148,264 + GFF800 0.77 +1.3 148,265 - GFF800 0.77 +0.8 148,396 + GFF800 0.84 -0.9 148,396 + GFF800 0.84 +1.5 148,396 + GFF800 0.84 +2.4 148,447 + GFF800 0.86 +0.0 148,523 - GFF800 0.90 +1.1 148,753 + -0.5 148,753 + +1.2 148,773 + GFF801 0.17 +2.0 149,024 + +1.7 149,024 + -0.3 149,090 - +0.7 149,543 + GFF802 0.39 +0.8 149,708 + GFF802 0.50 +1.0 149,793 - GFF802 0.56 +1.1 149,812 + GFF802 0.57 +0.6 149,813 - GFF802 0.57 +1.4 150,038 + GFF802 0.71 +0.6 150,062 - GFF802 0.73 -0.0 150,148 + GFF802 0.79 -2.0 150,149 - GFF802 0.79 +2.0 150,238 - GFF802 0.85 +0.4 150,238 - GFF802 0.85 +2.2 150,524 + +2.7 150,525 - +0.3 150,528 + +0.5 150,617 + +1.5 150,617 + +1.8 150,660 + GFF803 0.11 +1.6 150,699 + GFF803 0.13 +1.1 150,700 - GFF803 0.13 -0.3 150,700 - GFF803 0.13 +0.3 151,077 - GFF803 0.31 +0.3 151,184 + GFF803 0.36 +2.3 151,184 + GFF803 0.36 -0.6 151,447 - GFF803 0.49 +0.2
Or see this region's nucleotide sequence