Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF768 and GFF769 are separated by 236 nucleotides GFF769 and GFF770 overlap by 1 nucleotides GFF770 and GFF771 are separated by 6 nucleotides
GFF768 - Arginine ABC transporter, periplasmic arginine-binding protein ArtJ, at 124,999 to 125,730
GFF768
GFF769 - Arginine ABC transporter, permease protein ArtM, at 125,967 to 126,635
GFF769
GFF770 - Arginine ABC transporter, permease protein ArtQ, at 126,635 to 127,351
GFF770
GFF771 - Arginine ABC transporter, periplasmic arginine-binding protein ArtI, at 127,358 to 128,089
GFF771
Position (kb) 125
126
127 Strain fitness (log2 ratio) -2
-1
0
1
2 at 124.993 kb on + strand at 124.994 kb on - strand at 124.994 kb on - strand at 125.091 kb on + strand, within GFF768 at 125.133 kb on - strand, within GFF768 at 125.229 kb on + strand, within GFF768 at 125.360 kb on - strand, within GFF768 at 125.420 kb on + strand, within GFF768 at 125.430 kb on + strand, within GFF768 at 125.514 kb on + strand, within GFF768 at 125.544 kb on + strand, within GFF768 at 125.570 kb on - strand, within GFF768 at 125.757 kb on - strand at 125.888 kb on - strand at 125.968 kb on + strand at 126.069 kb on + strand, within GFF769 at 126.137 kb on + strand, within GFF769 at 126.140 kb on - strand, within GFF769 at 126.140 kb on - strand, within GFF769 at 126.153 kb on - strand, within GFF769 at 126.169 kb on - strand, within GFF769 at 126.179 kb on + strand, within GFF769 at 126.185 kb on - strand, within GFF769 at 126.233 kb on + strand, within GFF769 at 126.304 kb on + strand, within GFF769 at 126.398 kb on - strand, within GFF769 at 126.519 kb on + strand, within GFF769 at 126.520 kb on - strand, within GFF769 at 126.570 kb on - strand at 126.637 kb on - strand at 126.674 kb on + strand at 127.008 kb on + strand, within GFF770 at 127.106 kb on + strand, within GFF770 at 127.215 kb on - strand, within GFF770 at 127.269 kb on - strand, within GFF770 at 127.360 kb on - strand at 127.379 kb on - strand at 127.464 kb on - strand, within GFF771 at 127.511 kb on - strand, within GFF771 at 127.511 kb on - strand, within GFF771 at 127.531 kb on + strand, within GFF771
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 124,993 + +0.2 124,994 - +0.6 124,994 - +0.3 125,091 + GFF768 0.13 -0.1 125,133 - GFF768 0.18 -0.5 125,229 + GFF768 0.31 -1.9 125,360 - GFF768 0.49 -1.2 125,420 + GFF768 0.58 -0.2 125,430 + GFF768 0.59 +1.1 125,514 + GFF768 0.70 +0.2 125,544 + GFF768 0.74 +1.2 125,570 - GFF768 0.78 +0.2 125,757 - -0.1 125,888 - +0.3 125,968 + +0.5 126,069 + GFF769 0.15 -0.6 126,137 + GFF769 0.25 -0.0 126,140 - GFF769 0.26 +0.0 126,140 - GFF769 0.26 +2.1 126,153 - GFF769 0.28 +0.3 126,169 - GFF769 0.30 +0.7 126,179 + GFF769 0.32 -0.1 126,185 - GFF769 0.33 +1.0 126,233 + GFF769 0.40 +1.1 126,304 + GFF769 0.50 -0.1 126,398 - GFF769 0.64 +1.3 126,519 + GFF769 0.83 +0.5 126,520 - GFF769 0.83 -0.3 126,570 - +1.1 126,637 - -0.3 126,674 + -1.0 127,008 + GFF770 0.52 -0.3 127,106 + GFF770 0.66 +1.4 127,215 - GFF770 0.81 -0.1 127,269 - GFF770 0.88 +0.8 127,360 - -0.1 127,379 - +1.7 127,464 - GFF771 0.14 -0.1 127,511 - GFF771 0.21 -0.0 127,511 - GFF771 0.21 +0.3 127,531 + GFF771 0.24 +0.7
Or see this region's nucleotide sequence