Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4264 and GFF4265 are separated by 39 nucleotides GFF4265 and GFF4266 are separated by 40 nucleotides
GFF4264 - 2-methylcitrate synthase (EC 2.3.3.5), at 49,199 to 50,368
GFF4264
GFF4265 - 2-methylcitrate dehydratase (EC 4.2.1.79), at 50,408 to 51,859
GFF4265
GFF4266 - Propionate--CoA ligase (EC 6.2.1.17), at 51,900 to 53,786
GFF4266
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-2
-1
0
1 at 49.433 kb on + strand, within GFF4264 at 49.434 kb on - strand, within GFF4264 at 49.434 kb on - strand, within GFF4264 at 49.579 kb on + strand, within GFF4264 at 49.580 kb on - strand, within GFF4264 at 49.580 kb on - strand, within GFF4264 at 49.656 kb on - strand, within GFF4264 at 49.676 kb on - strand, within GFF4264 at 49.772 kb on - strand, within GFF4264 at 49.788 kb on - strand, within GFF4264 at 50.108 kb on + strand, within GFF4264 at 50.109 kb on - strand, within GFF4264 at 50.193 kb on - strand, within GFF4264 at 50.273 kb on - strand at 50.318 kb on + strand at 50.318 kb on + strand at 50.318 kb on + strand at 50.367 kb on - strand at 50.407 kb on + strand at 50.476 kb on + strand at 50.523 kb on - strand at 50.752 kb on + strand, within GFF4265 at 51.234 kb on - strand, within GFF4265 at 51.455 kb on + strand, within GFF4265 at 51.455 kb on + strand, within GFF4265 at 51.456 kb on - strand, within GFF4265 at 51.613 kb on + strand, within GFF4265 at 51.614 kb on - strand, within GFF4265 at 51.641 kb on - strand, within GFF4265 at 51.846 kb on + strand at 51.872 kb on + strand at 52.052 kb on + strand at 52.057 kb on + strand at 52.058 kb on - strand at 52.058 kb on - strand at 52.058 kb on - strand at 52.064 kb on + strand at 52.064 kb on + strand at 52.065 kb on - strand at 52.239 kb on + strand, within GFF4266 at 52.239 kb on + strand, within GFF4266 at 52.242 kb on - strand, within GFF4266 at 52.442 kb on + strand, within GFF4266 at 52.614 kb on + strand, within GFF4266 at 52.615 kb on - strand, within GFF4266 at 52.615 kb on - strand, within GFF4266 at 52.770 kb on + strand, within GFF4266 at 52.770 kb on + strand, within GFF4266
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 49,433 + GFF4264 0.20 +1.3 49,434 - GFF4264 0.20 -0.3 49,434 - GFF4264 0.20 -0.5 49,579 + GFF4264 0.32 -0.2 49,580 - GFF4264 0.33 -0.2 49,580 - GFF4264 0.33 -1.1 49,656 - GFF4264 0.39 -1.2 49,676 - GFF4264 0.41 -0.0 49,772 - GFF4264 0.49 +0.4 49,788 - GFF4264 0.50 -1.0 50,108 + GFF4264 0.78 -0.5 50,109 - GFF4264 0.78 -0.8 50,193 - GFF4264 0.85 -1.9 50,273 - -0.7 50,318 + -0.3 50,318 + +0.1 50,318 + +0.8 50,367 - +0.2 50,407 + -1.2 50,476 + -0.3 50,523 - -0.9 50,752 + GFF4265 0.24 -1.3 51,234 - GFF4265 0.57 -1.6 51,455 + GFF4265 0.72 -1.5 51,455 + GFF4265 0.72 -0.3 51,456 - GFF4265 0.72 -0.4 51,613 + GFF4265 0.83 -0.4 51,614 - GFF4265 0.83 +0.1 51,641 - GFF4265 0.85 -0.4 51,846 + -1.2 51,872 + -0.6 52,052 + -0.6 52,057 + +0.6 52,058 - -0.6 52,058 - -0.8 52,058 - -1.2 52,064 + -1.0 52,064 + -1.3 52,065 - +1.4 52,239 + GFF4266 0.18 -0.6 52,239 + GFF4266 0.18 -0.9 52,242 - GFF4266 0.18 -0.3 52,442 + GFF4266 0.29 -0.0 52,614 + GFF4266 0.38 +0.6 52,615 - GFF4266 0.38 -0.1 52,615 - GFF4266 0.38 +0.4 52,770 + GFF4266 0.46 -1.1 52,770 + GFF4266 0.46 +0.2
Or see this region's nucleotide sequence