Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2308 and GFF2309 are separated by 398 nucleotides GFF2309 and GFF2310 are separated by 84 nucleotides GFF2310 and GFF2311 overlap by 4 nucleotides GFF2311 and GFF2312 are separated by 92 nucleotides
GFF2308 - Glycerol uptake facilitator protein, at 94,795 to 95,640
GFF2308
GFF2309 - FIG074102: hypothetical protein, at 96,039 to 96,278
GFF2309
GFF2310 - hypothetical protein, at 96,363 to 96,503
GFF2310
GFF2311 - Ribonuclease E inhibitor RraA, at 96,500 to 96,985
GFF2311
GFF2312 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74), at 97,078 to 98,019
GFF2312
Position (kb) 96
97 Strain fitness (log2 ratio) -2
-1
0
1 at 95.229 kb on - strand, within GFF2308 at 95.229 kb on - strand, within GFF2308 at 95.280 kb on + strand, within GFF2308 at 95.373 kb on + strand, within GFF2308 at 95.472 kb on - strand, within GFF2308 at 95.476 kb on - strand, within GFF2308 at 95.530 kb on - strand, within GFF2308 at 95.620 kb on + strand at 95.620 kb on + strand at 95.659 kb on - strand at 95.662 kb on + strand at 95.662 kb on + strand at 95.663 kb on - strand at 95.663 kb on - strand at 95.722 kb on + strand at 95.773 kb on + strand at 95.774 kb on - strand at 95.875 kb on + strand at 95.876 kb on - strand at 95.894 kb on + strand at 95.940 kb on - strand at 95.983 kb on - strand at 95.983 kb on - strand at 95.984 kb on + strand at 95.985 kb on - strand at 95.985 kb on - strand at 95.986 kb on + strand at 96.046 kb on + strand at 96.203 kb on + strand, within GFF2309 at 96.336 kb on + strand at 96.393 kb on + strand, within GFF2310 at 96.395 kb on + strand, within GFF2310 at 96.438 kb on - strand, within GFF2310 at 96.713 kb on - strand, within GFF2311 at 96.979 kb on - strand at 97.023 kb on - strand at 97.023 kb on - strand at 97.037 kb on - strand at 97.069 kb on - strand at 97.069 kb on - strand at 97.118 kb on - strand at 97.195 kb on + strand, within GFF2312 at 97.196 kb on - strand, within GFF2312 at 97.276 kb on - strand, within GFF2312
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 95,229 - GFF2308 0.51 +0.2 95,229 - GFF2308 0.51 -0.5 95,280 + GFF2308 0.57 -0.3 95,373 + GFF2308 0.68 -0.8 95,472 - GFF2308 0.80 -0.7 95,476 - GFF2308 0.80 -0.0 95,530 - GFF2308 0.87 +0.9 95,620 + -0.9 95,620 + -0.0 95,659 - -0.1 95,662 + -0.5 95,662 + -0.3 95,663 - +0.3 95,663 - +0.2 95,722 + +0.1 95,773 + +0.5 95,774 - +0.1 95,875 + -1.1 95,876 - +0.3 95,894 + -2.4 95,940 - +0.0 95,983 - -0.4 95,983 - +0.4 95,984 + +0.4 95,985 - +0.2 95,985 - +0.4 95,986 + +1.0 96,046 + +0.8 96,203 + GFF2309 0.68 +0.5 96,336 + -0.2 96,393 + GFF2310 0.21 +0.5 96,395 + GFF2310 0.23 +0.4 96,438 - GFF2310 0.53 +1.0 96,713 - GFF2311 0.44 -0.9 96,979 - -2.0 97,023 - +0.1 97,023 - +0.2 97,037 - -0.2 97,069 - +0.4 97,069 - +0.1 97,118 - -0.0 97,195 + GFF2312 0.12 +0.7 97,196 - GFF2312 0.13 +0.1 97,276 - GFF2312 0.21 -1.5
Or see this region's nucleotide sequence