Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3377 and GFF3378 are separated by 123 nucleotides GFF3378 and GFF3379 are separated by 2 nucleotides
GFF3377 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41), at 142,523 to 143,728
GFF3377
GFF3378 - Aminodeoxychorismate lyase (EC 4.1.3.38), at 143,852 to 144,661
GFF3378
GFF3379 - FIG004453: protein YceG like, at 144,664 to 145,686
GFF3379
Position (kb) 143
144
145 Strain fitness (log2 ratio) -1
0
1
2 at 142.931 kb on - strand, within GFF3377 at 142.931 kb on - strand, within GFF3377 at 142.937 kb on + strand, within GFF3377 at 142.937 kb on + strand, within GFF3377 at 142.938 kb on - strand, within GFF3377 at 143.085 kb on + strand, within GFF3377 at 143.288 kb on + strand, within GFF3377 at 143.288 kb on + strand, within GFF3377 at 143.294 kb on - strand, within GFF3377 at 143.533 kb on - strand, within GFF3377 at 143.533 kb on - strand, within GFF3377 at 143.539 kb on + strand, within GFF3377 at 143.698 kb on + strand at 143.726 kb on + strand at 143.790 kb on - strand at 143.892 kb on + strand at 144.507 kb on + strand, within GFF3378 at 144.575 kb on - strand, within GFF3378 at 144.765 kb on - strand at 144.769 kb on - strand, within GFF3379 at 144.783 kb on + strand, within GFF3379 at 144.836 kb on - strand, within GFF3379 at 145.043 kb on + strand, within GFF3379 at 145.044 kb on - strand, within GFF3379 at 145.068 kb on + strand, within GFF3379 at 145.069 kb on - strand, within GFF3379 at 145.166 kb on - strand, within GFF3379 at 145.166 kb on - strand, within GFF3379 at 145.360 kb on - strand, within GFF3379 at 145.429 kb on + strand, within GFF3379 at 145.430 kb on - strand, within GFF3379 at 145.430 kb on - strand, within GFF3379 at 145.430 kb on - strand, within GFF3379 at 145.431 kb on + strand, within GFF3379 at 145.484 kb on - strand, within GFF3379 at 145.485 kb on + strand, within GFF3379
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 142,931 - GFF3377 0.34 +0.8 142,931 - GFF3377 0.34 +1.1 142,937 + GFF3377 0.34 -0.3 142,937 + GFF3377 0.34 +0.4 142,938 - GFF3377 0.34 +0.4 143,085 + GFF3377 0.47 -0.2 143,288 + GFF3377 0.63 -0.3 143,288 + GFF3377 0.63 +0.0 143,294 - GFF3377 0.64 +0.8 143,533 - GFF3377 0.84 -1.2 143,533 - GFF3377 0.84 +0.7 143,539 + GFF3377 0.84 +0.2 143,698 + +0.5 143,726 + -0.2 143,790 - -0.9 143,892 + -0.1 144,507 + GFF3378 0.81 -0.7 144,575 - GFF3378 0.89 -0.9 144,765 - -1.0 144,769 - GFF3379 0.10 +0.1 144,783 + GFF3379 0.12 +0.1 144,836 - GFF3379 0.17 +0.2 145,043 + GFF3379 0.37 -1.4 145,044 - GFF3379 0.37 +0.4 145,068 + GFF3379 0.39 -0.2 145,069 - GFF3379 0.40 +2.1 145,166 - GFF3379 0.49 -0.3 145,166 - GFF3379 0.49 +0.3 145,360 - GFF3379 0.68 -0.6 145,429 + GFF3379 0.75 +0.3 145,430 - GFF3379 0.75 +0.4 145,430 - GFF3379 0.75 +0.6 145,430 - GFF3379 0.75 -0.2 145,431 + GFF3379 0.75 -0.1 145,484 - GFF3379 0.80 +0.4 145,485 + GFF3379 0.80 -0.3
Or see this region's nucleotide sequence