Strain Fitness in Escherichia coli BW25113 around b3248

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
3,394,818	+	cafA	b3247	0.32	-0.5
3,394,898	+	cafA	b3247	0.37	+0.8
3,394,922	+	cafA	b3247	0.39	-1.0
3,395,036	+	cafA	b3247	0.47	+0.1
3,395,041	-	cafA	b3247	0.47	+0.5
3,395,041	-	cafA	b3247	0.47	+0.4
3,395,044	-	cafA	b3247	0.47	-0.5
3,395,097	-	cafA	b3247	0.51	+0.0
3,395,105	-	cafA	b3247	0.51	+0.2
3,395,121	+	cafA	b3247	0.53	+0.3
3,395,139	-	cafA	b3247	0.54	-0.1
3,395,188	+	cafA	b3247	0.57	-0.3
3,395,193	+	cafA	b3247	0.57	-0.0
3,395,201	-	cafA	b3247	0.58	-0.6
3,395,231	+	cafA	b3247	0.60	+0.4
3,395,254	-	cafA	b3247	0.62	-0.2
3,395,254	-	cafA	b3247	0.62	-0.1
3,395,272	-	cafA	b3247	0.63	-0.4
3,395,283	+	cafA	b3247	0.64	+0.2
3,395,291	-	cafA	b3247	0.64	+0.3
3,395,292	+	cafA	b3247	0.64	+0.1
3,395,292	+	cafA	b3247	0.64	+0.3
3,395,318	-	cafA	b3247	0.66	-0.5
3,395,318	-	cafA	b3247	0.66	+0.2
3,395,328	-	cafA	b3247	0.67	-0.4
3,395,330	+	cafA	b3247	0.67	+0.2
3,395,330	+	cafA	b3247	0.67	-0.7
3,395,335	+	cafA	b3247	0.67	+0.2
3,395,387	-	cafA	b3247	0.71	+0.0
3,395,397	+	cafA	b3247	0.71	+0.4
3,395,397	+	cafA	b3247	0.71	+0.1
3,395,414	-	cafA	b3247	0.73	+0.2
3,395,479	-	cafA	b3247	0.77	-0.2
3,395,532	+	cafA	b3247	0.81	+0.1
3,395,532	+	cafA	b3247	0.81	+1.1
3,395,542	+	cafA	b3247	0.81	+0.4
3,395,560	-	cafA	b3247	0.82	+1.4
3,395,568	-	cafA	b3247	0.83	+0.2
3,395,568	-	cafA	b3247	0.83	-0.7
3,395,599	+	cafA	b3247	0.85	-0.1
3,395,599	+	cafA	b3247	0.85	-0.5
3,395,666	-	cafA	b3247	0.90	-0.4
3,395,677	+				+0.3
3,395,689	+				-0.1
3,395,690	+				+0.3
3,395,690	+				+0.2
3,395,787	+				+0.4
3,395,893	-	yhdE	b3248	0.14	+1.1
3,395,897	-	yhdE	b3248	0.15	+0.5
3,395,897	-	yhdE	b3248	0.15	+1.3
3,395,923	+	yhdE	b3248	0.20	-0.1
3,395,923	+	yhdE	b3248	0.20	+0.2
3,395,941	+	yhdE	b3248	0.23	+0.3
3,395,956	-	yhdE	b3248	0.25	+0.3
3,395,964	-	yhdE	b3248	0.26	+0.0
3,395,966	+	yhdE	b3248	0.27	+0.1
3,395,987	-	yhdE	b3248	0.30	+0.3
3,395,987	-	yhdE	b3248	0.30	-0.2
3,396,058	-	yhdE	b3248	0.42	+0.3
3,396,117	-	yhdE	b3248	0.52	+0.4
3,396,139	+	yhdE	b3248	0.56	+0.2
3,396,166	-	yhdE	b3248	0.60	-0.3
3,396,166	-	yhdE	b3248	0.60	+0.2
3,396,176	-	yhdE	b3248	0.62	+0.5
3,396,186	-	yhdE	b3248	0.64	+0.4
3,396,192	+	yhdE	b3248	0.65	-0.4
3,396,231	+	yhdE	b3248	0.71	+0.5
3,396,231	+	yhdE	b3248	0.71	-0.1
3,396,256	+	yhdE	b3248	0.76	+0.7
3,396,267	+	yhdE	b3248	0.77	-0.1
3,396,269	+	yhdE	b3248	0.78	-0.3
3,396,275	-	yhdE	b3248	0.79	+0.7
3,396,275	-	yhdE	b3248	0.79	+0.4
3,396,287	-	yhdE	b3248	0.81	+0.9
3,396,287	-	yhdE	b3248	0.81	+0.2
3,396,307	-	yhdE	b3248	0.84	+0.5
3,396,317	-	yhdE	b3248	0.86	+0.8
3,396,333	-	yhdE	b3248	0.89	+0.3
3,396,344	-				+0.3
3,396,344	-				+0.6
3,396,364	-				+0.6
3,396,364	-				+0.4
3,396,417	-				+0.3
3,396,924	-				-0.1
3,396,924	-				+0.5
3,396,934	-				+0.3
3,396,962	-				+0.3
3,397,084	-	mreC	b3250	0.17	+0.4
3,397,174	-	mreC	b3250	0.25	+0.0