Strain Fitness in Escherichia coli BW25113 around b3206

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
3,345,026	+	ptsN	b3204	0.87	-0.3
3,345,026	+	ptsN	b3204	0.87	+1.3
3,345,026	+	ptsN	b3204	0.87	+0.5
3,345,034	-	ptsN	b3204	0.88	-0.9
3,345,034	-	ptsN	b3204	0.88	-0.1
3,345,034	-	ptsN	b3204	0.88	-0.8
3,345,034	-	ptsN	b3204	0.88	-0.5
3,345,066	+				+1.6
3,345,072	+				+0.4
3,345,072	+				+0.5
3,345,102	-				-1.9
3,345,102	-				-1.2
3,345,102	-				-0.1
3,345,116	-				-0.4
3,345,116	-				-0.8
3,345,139	-				-1.8
3,345,140	+				-1.2
3,345,231	+	yhbJ	b3205	0.11	-0.7
3,345,249	-	yhbJ	b3205	0.13	-1.1
3,345,264	-	yhbJ	b3205	0.15	-1.6
3,345,264	-	yhbJ	b3205	0.15	+0.6
3,345,305	-	yhbJ	b3205	0.20	-1.1
3,345,343	+	yhbJ	b3205	0.24	-3.6
3,345,396	-	yhbJ	b3205	0.30	-0.8
3,345,698	+	yhbJ	b3205	0.66	-0.2
3,345,698	+	yhbJ	b3205	0.66	-0.5
3,345,735	+	yhbJ	b3205	0.70	-0.7
3,345,863	-	yhbJ	b3205	0.85	-0.5
3,345,863	-	yhbJ	b3205	0.85	-1.0
3,345,892	-	yhbJ	b3205	0.88	-1.4
3,345,892	-	yhbJ	b3205	0.88	-0.5
3,345,909	-				-0.8
3,345,953	+				-1.4
3,346,034	-	npr	b3206	0.17	-1.9
3,346,147	+	npr	b3206	0.58	+0.1
3,346,173	-	npr	b3206	0.68	-0.8
3,346,174	+	npr	b3206	0.68	-0.4
3,346,174	+	npr	b3206	0.68	-2.1
3,346,186	-	npr	b3206	0.73	-0.5
3,346,196	-	npr	b3206	0.76	-0.8
3,346,286	+				+0.0
3,346,286	+				-0.8
3,346,444	-				+0.0
3,346,487	-				+0.3
3,346,655	+	yrbL	b3207	0.29	+0.2
3,346,688	-	yrbL	b3207	0.34	-1.2
3,346,697	-	yrbL	b3207	0.35	-0.1
3,346,795	+	yrbL	b3207	0.51	-0.2
3,346,809	+	yrbL	b3207	0.53	+0.3
3,346,921	+	yrbL	b3207	0.71	-0.3
3,346,921	+	yrbL	b3207	0.71	+0.8
3,346,932	-	yrbL	b3207	0.72	+0.1
3,346,965	-	yrbL	b3207	0.78	+0.4
3,346,972	+	yrbL	b3207	0.79	-0.2
3,346,980	-	yrbL	b3207	0.80	+0.4
3,346,980	-	yrbL	b3207	0.80	-0.6
3,346,986	+	yrbL	b3207	0.81	+0.1
3,346,986	+	yrbL	b3207	0.81	+0.3
3,347,046	+				-0.0
3,347,086	-				+0.1
3,347,092	-				+0.2
3,347,111	+				-0.2
3,347,151	-				+0.1
3,347,178	+	mtgA	b3208	0.10	+0.3
3,347,178	+	mtgA	b3208	0.10	+0.4
3,347,178	+	mtgA	b3208	0.10	+0.2
3,347,178	+	mtgA	b3208	0.10	-0.5
3,347,184	+	mtgA	b3208	0.11	-0.1
3,347,192	-	mtgA	b3208	0.12	-0.7
3,347,205	-	mtgA	b3208	0.14	+0.6
3,347,205	-	mtgA	b3208	0.14	+0.4
3,347,226	+	mtgA	b3208	0.17	-0.2
3,347,226	+	mtgA	b3208	0.17	+0.4