Strain Fitness in Escherichia coli BW25113 around b2920

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
3,062,118	+	ygfG	b2919	0.13	+0.1
3,062,216	+	ygfG	b2919	0.26	+0.4
3,062,251	+	ygfG	b2919	0.30	+0.0
3,062,256	+	ygfG	b2919	0.31	+0.4
3,062,256	+	ygfG	b2919	0.31	+0.1
3,062,328	+	ygfG	b2919	0.40	-0.5
3,062,328	+	ygfG	b2919	0.40	-0.2
3,062,364	+	ygfG	b2919	0.44	-0.1
3,062,390	+	ygfG	b2919	0.48	+0.0
3,062,411	+	ygfG	b2919	0.50	-0.1
3,062,438	-	ygfG	b2919	0.54	-1.0
3,062,438	-	ygfG	b2919	0.54	-0.6
3,062,608	-	ygfG	b2919	0.75	+0.3
3,062,608	-	ygfG	b2919	0.75	+0.2
3,062,651	+	ygfG	b2919	0.81	-0.0
3,062,723	+				-0.2
3,062,731	-				+0.2
3,062,731	-				-0.0
3,062,785	-				-0.1
3,062,929	+				-0.1
3,062,937	-				+0.1
3,062,937	-				+0.1
3,062,937	-				-0.0
3,062,963	-				+0.0
3,063,104	+	ygfH	b2920	0.19	+0.1
3,063,314	-	ygfH	b2920	0.33	+0.7
3,063,314	-	ygfH	b2920	0.33	-0.1
3,063,372	+	ygfH	b2920	0.37	+0.5
3,063,422	-	ygfH	b2920	0.40	+0.1
3,063,432	-	ygfH	b2920	0.41	-0.4
3,063,432	-	ygfH	b2920	0.41	+0.8
3,063,695	-	ygfH	b2920	0.59	-0.7
3,063,851	-	ygfH	b2920	0.69	+0.2
3,064,041	-	ygfH	b2920	0.82	-0.1
3,064,102	+	ygfH	b2920	0.86	+0.7
3,064,102	+	ygfH	b2920	0.86	+0.3
3,064,127	+	ygfH	b2920	0.88	+0.4
3,064,127	+	ygfH	b2920	0.88	-0.1
3,064,145	-	ygfH	b2920	0.89	-0.2
3,064,154	-	ygfH	b2920	0.90	+0.2
3,064,174	+				+0.4
3,064,174	+				-0.6
3,064,174	-				-0.4
3,064,176	+				+0.4
3,064,187	+				+0.2
3,064,187	+				+0.6
3,064,188	+				-0.0
3,064,222	+				+0.7
3,064,240	+				-0.7
3,064,241	+				+0.4
3,064,241	+				+0.5
3,064,249	-				-0.7
3,064,291	+				+0.1
3,064,298	+				+0.0
3,064,298	+				-0.1
3,064,298	+				+0.4
3,064,298	+				+0.5
3,064,298	+				+0.2
3,064,299	-				+0.2
3,064,306	-				+0.1
3,064,306	-				+0.0
3,064,306	-				-0.2
3,064,306	-				-0.3
3,064,330	+				+0.2
3,064,330	-				-0.4
3,064,332	+				+0.2
3,064,389	+	ygfI	b2921	0.10	-0.4
3,064,391	-	ygfI	b2921	0.10	+0.8
3,064,395	-	ygfI	b2921	0.11	+0.1
3,064,397	-	ygfI	b2921	0.11	-0.3
3,064,397	-	ygfI	b2921	0.11	+0.3
3,064,397	-	ygfI	b2921	0.11	-0.1
3,064,399	+	ygfI	b2921	0.11	+0.1
3,064,402	-	ygfI	b2921	0.11	-0.6
3,064,404	+	ygfI	b2921	0.12	+0.1
3,064,407	-	ygfI	b2921	0.12	-0.1
3,064,407	-	ygfI	b2921	0.12	+0.4
3,064,407	-	ygfI	b2921	0.12	-0.1
3,064,419	-	ygfI	b2921	0.13	+0.8
3,064,435	+	ygfI	b2921	0.15	+0.3
3,064,438	-	ygfI	b2921	0.15	+0.1
3,064,466	-	ygfI	b2921	0.19	+0.0
3,064,467	+	ygfI	b2921	0.19	+0.2
3,064,490	+	ygfI	b2921	0.21	+0.2
3,064,493	-	ygfI	b2921	0.22	+0.5
3,064,498	-	ygfI	b2921	0.22	-1.2
3,064,534	-	ygfI	b2921	0.26	-0.0
3,064,535	+	ygfI	b2921	0.26	+0.5
3,064,555	-	ygfI	b2921	0.29	-0.0
3,064,555	-	ygfI	b2921	0.29	+0.9
3,064,555	-	ygfI	b2921	0.29	-0.3
3,064,585	+	ygfI	b2921	0.32	-0.1
3,064,585	+	ygfI	b2921	0.32	+0.2
3,064,615	+	ygfI	b2921	0.35	+0.5
3,064,627	+	ygfI	b2921	0.37	+0.3
3,064,636	-	ygfI	b2921	0.38	-0.2
3,064,638	+	ygfI	b2921	0.38	+0.1
3,064,663	-	ygfI	b2921	0.41	-0.3
3,064,663	-	ygfI	b2921	0.41	+0.1
3,064,702	-	ygfI	b2921	0.45	+0.1
3,064,708	-	ygfI	b2921	0.46	+0.2
3,064,708	-	ygfI	b2921	0.46	+0.4
3,064,743	-	ygfI	b2921	0.49	+0.2
3,064,817	+	ygfI	b2921	0.58	-0.4
3,064,817	+	ygfI	b2921	0.58	+0.2
3,064,837	+	ygfI	b2921	0.60	+0.3
3,064,837	+	ygfI	b2921	0.60	-0.1
3,064,837	+	ygfI	b2921	0.60	-0.3
3,064,837	+	ygfI	b2921	0.60	+0.7
3,064,837	+	ygfI	b2921	0.60	+0.1
3,064,845	-	ygfI	b2921	0.61	-0.7
3,064,848	+	ygfI	b2921	0.61	+0.6
3,064,848	+	ygfI	b2921	0.61	+0.5
3,064,858	+	ygfI	b2921	0.62	+0.3
3,064,858	+	ygfI	b2921	0.62	+0.4
3,064,891	+	ygfI	b2921	0.66	+0.3
3,064,891	+	ygfI	b2921	0.66	+0.4
3,064,975	+	ygfI	b2921	0.75	+0.1
3,064,997	+	ygfI	b2921	0.78	+0.2
3,064,997	+	ygfI	b2921	0.78	+1.3
3,065,056	-	ygfI	b2921	0.84	+0.2
3,065,072	+	ygfI	b2921	0.86	-0.6
3,065,125	-				+0.6
3,065,226	-				+0.2
3,065,244	+				+0.3
3,065,245	-				+0.2
3,065,259	+				+0.7
3,065,270	-				+0.1
3,065,284	+				+0.0