Strain Fitness in Escherichia coli BW25113 around b1814

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,893,960	-	pabB	b1812	0.83	+0.5
1,893,960	-	pabB	b1812	0.83	+0.3
1,894,035	+	pabB	b1812	0.89	+0.9
1,894,301	-	yeaB	b1813	0.18	+0.7
1,894,400	+	yeaB	b1813	0.36	+0.1
1,894,406	-	yeaB	b1813	0.37	+0.4
1,894,419	+	yeaB	b1813	0.39	+0.1
1,894,446	+	yeaB	b1813	0.44	+0.7
1,894,456	+	yeaB	b1813	0.45	+0.1
1,894,500	+	yeaB	b1813	0.53	+0.1
1,894,500	+	yeaB	b1813	0.53	-0.8
1,894,551	-	yeaB	b1813	0.62	+0.4
1,894,579	-	yeaB	b1813	0.66	+0.4
1,894,629	-	yeaB	b1813	0.75	-0.4
1,894,683	+	yeaB	b1813	0.84	+0.1
1,894,683	+	yeaB	b1813	0.84	+0.5
1,894,686	-	yeaB	b1813	0.85	+0.1
1,894,693	+	yeaB	b1813	0.86	-0.8
1,894,693	+	yeaB	b1813	0.86	-0.5
1,894,735	+				+0.0
1,894,766	+				+0.2
1,894,766	+				-0.0
1,894,804	+				+0.3
1,894,875	-				-1.6
1,894,875	-				+0.6
1,894,890	+				+0.4
1,894,890	+				+0.6
1,894,915	-				-0.5
1,894,961	-				+0.1
1,894,997	+				-1.2
1,895,002	-				-1.0
1,895,028	-				+0.4
1,895,028	-				+0.1
1,895,039	-				-0.8
1,895,039	-				-0.4
1,895,465	+	sdaA	b1814	0.37	-0.3
1,895,498	-	sdaA	b1814	0.40	-1.4
1,895,540	-	sdaA	b1814	0.43	-0.4
1,895,646	-	sdaA	b1814	0.51	-0.3
1,895,646	-	sdaA	b1814	0.51	-1.2
1,896,004	-	sdaA	b1814	0.77	-1.6
1,896,004	-	sdaA	b1814	0.77	-0.9
1,896,254	+				+0.1
1,896,386	-				-0.2
1,896,440	-				+0.0
1,896,440	-				+0.2
1,896,564	+				-0.4
1,896,618	-	b1815	b1815	0.10	+0.1
1,896,650	+	b1815	b1815	0.12	+0.3
1,896,681	+	b1815	b1815	0.14	+0.4
1,896,681	+	b1815	b1815	0.14	+0.4
1,896,686	+	b1815	b1815	0.15	+0.4
1,896,770	-	b1815	b1815	0.20	+0.1
1,896,770	-	b1815	b1815	0.20	+0.3
1,896,929	+	b1815	b1815	0.30	+0.3
1,896,956	-	b1815	b1815	0.32	+0.0
1,897,151	-	b1815	b1815	0.44	+0.3