Strain Fitness in Escherichia coli BW25113 around b1638
Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,715,267 | - | -0.0 | |||
1,715,267 | - | +0.1 | |||
1,716,201 | - | ydhA | b1639 | 0.34 | +0.4 |
1,716,224 | + | ydhA | b1639 | 0.41 | +0.3 |
1,716,226 | + | ydhA | b1639 | 0.41 | +0.5 |
1,716,226 | + | ydhA | b1639 | 0.41 | +1.1 |
1,716,370 | - | ydhA | b1639 | 0.85 | -0.1 |
1,716,375 | + | ydhA | b1639 | 0.86 | -0.1 |
1,716,375 | + | ydhA | b1639 | 0.86 | +0.5 |
1,716,447 | + | +0.2 | |||
1,716,447 | + | -1.5 | |||
1,716,447 | + | +0.2 | |||
1,716,450 | - | -0.1 | |||
1,716,554 | - | +0.4 | |||
1,716,810 | + | ydhH | b1640 | 0.26 | +0.0 |
1,716,989 | - | ydhH | b1640 | 0.43 | -0.3 |
Or see this region's nucleotide sequence