Strain Fitness in Escherichia coli BW25113 around b1634

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,709,843	+	nth	b1633	0.47	-0.1
1,709,859	+	nth	b1633	0.49	-0.2
1,709,859	+	nth	b1633	0.49	+0.6
1,709,876	+	nth	b1633	0.52	+0.1
1,709,876	+	nth	b1633	0.52	+0.7
1,710,159	+				+0.4
1,710,274	-				-0.1
1,710,551	-				-0.5
1,710,837	-				-2.5
1,710,838	-				-2.4
1,710,870	-				-2.6
1,711,174	-	tppB	b1634	0.25	-1.9
1,711,239	-	tppB	b1634	0.30	-0.9
1,711,254	+	tppB	b1634	0.31	-2.9
1,711,352	+	tppB	b1634	0.37	-2.1
1,711,360	-	tppB	b1634	0.38	-2.9
1,711,360	-	tppB	b1634	0.38	-1.7
1,711,360	-	tppB	b1634	0.38	-2.6
1,711,402	+	tppB	b1634	0.41	-1.1
1,711,402	+	tppB	b1634	0.41	-4.0
1,711,536	+	tppB	b1634	0.49	-3.0
1,711,536	+	tppB	b1634	0.49	-1.4
1,711,582	-	tppB	b1634	0.52	-1.9
1,711,803	-	tppB	b1634	0.67	-2.4
1,711,932	-	tppB	b1634	0.76	-1.2
1,711,978	-	tppB	b1634	0.79	-0.6
1,712,070	-	tppB	b1634	0.85	-2.9
1,712,104	-	tppB	b1634	0.87	-2.9
1,712,104	-	tppB	b1634	0.87	-2.1
1,712,109	+	tppB	b1634	0.88	-1.9
1,712,543	-	gst	b1635	0.23	+0.3
1,712,623	-	gst	b1635	0.37	-0.2
1,712,715	+	gst	b1635	0.52	+0.2
1,713,214	+	pdxY	b1636	0.19	-0.5
1,713,223	+	pdxY	b1636	0.20	+0.4
1,713,223	+	pdxY	b1636	0.20	-0.8
1,713,223	+	pdxY	b1636	0.20	+0.5