Strain Fitness in Escherichia coli BW25113 around b1612

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,683,859	-	fumC	b1611	0.46	+0.1
1,683,859	-	fumC	b1611	0.46	-1.0
1,683,981	-	fumC	b1611	0.55	+0.1
1,684,016	-	fumC	b1611	0.57	+0.3
1,684,016	-	fumC	b1611	0.57	+0.3
1,684,247	+	fumC	b1611	0.74	+0.5
1,684,247	+	fumC	b1611	0.74	-0.4
1,684,600	+				-0.2
1,684,600	+				+0.0
1,685,163	+	fumA	b1612	0.25	-0.2
1,685,193	+	fumA	b1612	0.27	+0.0
1,685,290	-	fumA	b1612	0.32	-0.5
1,685,290	-	fumA	b1612	0.32	-0.1
1,685,310	+	fumA	b1612	0.34	-0.4
1,685,344	+	fumA	b1612	0.36	+1.0
1,685,895	-	fumA	b1612	0.69	+0.8
1,685,895	-	fumA	b1612	0.69	+0.6
1,686,443	+				+0.4
1,686,629	-				+0.4
1,686,693	+				+0.3
1,686,718	-	manA	b1613	0.10	-1.2
1,686,749	-	manA	b1613	0.13	-1.1
1,686,749	-	manA	b1613	0.13	+0.6
1,686,883	-	manA	b1613	0.24	-0.2
1,687,299	+	manA	b1613	0.59	+0.1
1,687,351	+	manA	b1613	0.64	-0.1