Strain Fitness in Escherichia coli BW25113 around b1611

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,682,223	+				-0.9
1,682,223	+				+0.2
1,682,306	-				+0.1
1,682,451	-	tus	b1610	0.18	+0.3
1,682,567	-	tus	b1610	0.31	+0.1
1,682,620	+	tus	b1610	0.36	+0.3
1,682,620	+	tus	b1610	0.36	+1.3
1,682,820	+	tus	b1610	0.58	-0.4
1,682,838	+	tus	b1610	0.60	+0.4
1,682,878	+	tus	b1610	0.64	+0.5
1,682,886	-	tus	b1610	0.65	-0.3
1,682,941	-	tus	b1610	0.71	+0.6
1,682,941	-	tus	b1610	0.71	+0.4
1,683,046	+	tus	b1610	0.82	+0.5
1,683,046	+	tus	b1610	0.82	-0.5
1,683,207	+				+0.4
1,683,241	+				-0.6
1,683,295	+				-0.4
1,683,295	+				+0.1
1,683,439	+	fumC	b1611	0.16	-0.0
1,683,595	+	fumC	b1611	0.27	+0.1
1,683,612	+	fumC	b1611	0.29	+0.1
1,683,612	+	fumC	b1611	0.29	+0.5
1,683,665	-	fumC	b1611	0.32	+0.9
1,683,665	-	fumC	b1611	0.32	-0.3
1,683,709	+	fumC	b1611	0.36	+0.2
1,683,709	+	fumC	b1611	0.36	-0.4
1,683,859	-	fumC	b1611	0.46	+0.1
1,683,859	-	fumC	b1611	0.46	-1.0
1,683,981	-	fumC	b1611	0.55	+0.1
1,684,016	-	fumC	b1611	0.57	+0.3
1,684,016	-	fumC	b1611	0.57	+0.3
1,684,247	+	fumC	b1611	0.74	+0.5
1,684,247	+	fumC	b1611	0.74	-0.4
1,684,600	+				-0.2
1,684,600	+				+0.0
1,685,163	+	fumA	b1612	0.25	-0.2
1,685,193	+	fumA	b1612	0.27	+0.0
1,685,290	-	fumA	b1612	0.32	-0.5
1,685,290	-	fumA	b1612	0.32	-0.1
1,685,310	+	fumA	b1612	0.34	-0.4
1,685,344	+	fumA	b1612	0.36	+1.0