Strain Fitness in Escherichia coli BW25113 around b1355
Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,416,473 | + | -0.6 | |||
1,416,624 | - | -0.8 | |||
1,416,644 | - | -0.1 | |||
1,416,679 | - | -1.9 | |||
1,416,958 | - | sieB | b1353 | 0.54 | -1.0 |
1,417,076 | - | sieB | b1353 | 0.78 | +0.3 |
1,417,079 | - | sieB | b1353 | 0.79 | +0.8 |
1,417,082 | - | sieB | b1353 | 0.79 | -1.4 |
1,417,082 | - | sieB | b1353 | 0.79 | +1.2 |
1,417,082 | - | sieB | b1353 | 0.79 | +0.5 |
1,417,082 | - | sieB | b1353 | 0.79 | +0.4 |
1,417,082 | - | sieB | b1353 | 0.79 | +0.2 |
1,417,082 | - | sieB | b1353 | 0.79 | -0.1 |
1,417,092 | - | sieB | b1353 | 0.81 | +0.1 |
1,417,101 | - | sieB | b1353 | 0.83 | +0.2 |
1,417,190 | - | +0.5 | |||
1,417,200 | - | b1354 | b4527 | 0.13 | +0.3 |
1,417,207 | - | b1354 | b4527 | 0.17 | -0.2 |
1,417,207 | - | b1354 | b4527 | 0.17 | +0.7 |
1,417,276 | - | b1354 | b4527 | 0.62 | +0.2 |
1,417,276 | - | b1354 | b4527 | 0.62 | +0.1 |
1,417,312 | - | b1354 | b4527 | 0.85 | +0.5 |
1,417,371 | - | b1355 | b1355 | 0.19 | +0.7 |
1,417,427 | + | b1355 | b1355 | 0.60 | -0.2 |
1,417,431 | - | b1355 | b1355 | 0.63 | +0.1 |
1,417,459 | + | b1355 | b1355 | 0.84 | +0.0 |
1,417,518 | - | +0.4 | |||
1,417,574 | + | -0.3 |
Or see this region's nucleotide sequence