Strain Fitness in Escherichia coli BW25113 around b0185
Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
208,591 | + | +0.0 | |||
209,655 | - | +0.5 | |||
209,826 | - | +0.2 | |||
209,832 | - | +0.5 | |||
209,856 | + | -0.1 | |||
209,856 | + | -0.0 | |||
209,864 | - | +0.3 | |||
209,930 | - | ldcC | b0186 | 0.12 | -0.8 |
209,944 | - | ldcC | b0186 | 0.12 | +0.0 |
209,960 | + | ldcC | b0186 | 0.13 | -0.8 |
209,960 | + | ldcC | b0186 | 0.13 | +0.9 |
209,961 | - | ldcC | b0186 | 0.13 | +0.2 |
209,994 | + | ldcC | b0186 | 0.15 | -0.0 |
209,997 | - | ldcC | b0186 | 0.15 | +0.3 |
210,032 | + | ldcC | b0186 | 0.16 | +1.1 |
210,098 | - | ldcC | b0186 | 0.20 | -0.4 |
210,202 | + | ldcC | b0186 | 0.24 | -0.2 |
210,251 | + | ldcC | b0186 | 0.27 | -0.2 |
210,375 | + | ldcC | b0186 | 0.32 | -0.7 |
210,375 | + | ldcC | b0186 | 0.32 | +0.8 |
210,398 | - | ldcC | b0186 | 0.34 | -0.1 |
210,425 | - | ldcC | b0186 | 0.35 | +0.8 |
210,440 | + | ldcC | b0186 | 0.36 | +0.2 |
210,458 | - | ldcC | b0186 | 0.36 | +0.3 |
210,549 | + | ldcC | b0186 | 0.41 | -0.2 |
210,557 | - | ldcC | b0186 | 0.41 | +0.1 |
Or see this region's nucleotide sequence