Strain Fitness in Escherichia coli BW25113 around b0143

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
156,734	+	yadN	b0141	0.74	+0.1
156,735	+	yadN	b0141	0.75	-0.8
156,735	+	yadN	b0141	0.75	+0.7
156,744	+	yadN	b0141	0.76	+0.9
156,755	+	yadN	b0141	0.78	-0.2
156,757	+	yadN	b0141	0.78	-0.5
156,759	+	yadN	b0141	0.79	+0.1
156,786	+	yadN	b0141	0.83	-0.7
156,789	+	yadN	b0141	0.84	-0.0
156,793	+	yadN	b0141	0.84	+0.5
156,804	+	yadN	b0141	0.86	+0.3
156,823	+	yadN	b0141	0.90	-0.0
156,823	+	yadN	b0141	0.90	+0.1
156,825	+				+0.0
156,827	+				+0.3
156,827	+				+0.9
156,834	+				-0.6
156,849	+				-0.4
156,849	+				-0.1
156,849	+				+0.3
156,850	+				+0.1
156,854	+				+0.8
156,854	+				+0.3
157,218	-				-0.1
157,279	-				-0.3
157,291	-				-0.1
157,301	-	folK	b0142	0.10	-0.1
157,745	+				-0.6
157,870	-	pcnB	b0143	0.10	+0.2
157,906	-	pcnB	b0143	0.13	-1.3
157,906	-	pcnB	b0143	0.13	-0.1
157,923	-	pcnB	b0143	0.14	-1.0
158,143	+	pcnB	b0143	0.30	-1.6
158,156	+	pcnB	b0143	0.31	-0.0
158,227	-	pcnB	b0143	0.36	-0.5
158,249	-	pcnB	b0143	0.37	-0.7
158,249	-	pcnB	b0143	0.37	-0.2
158,312	-	pcnB	b0143	0.42	-0.9
158,342	-	pcnB	b0143	0.44	-0.5
158,378	-	pcnB	b0143	0.46	-1.0
158,400	+	pcnB	b0143	0.48	-0.8
158,408	-	pcnB	b0143	0.49	-0.6
158,408	-	pcnB	b0143	0.49	-0.6
158,426	-	pcnB	b0143	0.50	-1.5
158,442	-	pcnB	b0143	0.51	-1.2
158,442	-	pcnB	b0143	0.51	+0.5
158,447	-	pcnB	b0143	0.51	-1.0
158,516	+	pcnB	b0143	0.56	-1.3
158,522	-	pcnB	b0143	0.57	-0.7
158,759	-	pcnB	b0143	0.74	-0.7
158,759	-	pcnB	b0143	0.74	+1.0
158,759	-	pcnB	b0143	0.74	-0.5
158,864	-	pcnB	b0143	0.81	-0.3
159,038	-				-0.4
159,093	-				+1.3
159,093	-				-0.3
159,133	+				-1.1
159,347	-	yadB	b0144	0.17	+0.7
159,347	-	yadB	b0144	0.17	-0.2
159,352	-	yadB	b0144	0.18	+0.2
159,352	-	yadB	b0144	0.18	-0.1
159,581	-	yadB	b0144	0.43	+0.0
159,655	+	yadB	b0144	0.51	-0.1
159,699	+	yadB	b0144	0.55	+0.6
159,722	-	yadB	b0144	0.58	+0.6
159,722	-	yadB	b0144	0.58	+0.2
159,743	-	yadB	b0144	0.60	-0.3
159,754	-	yadB	b0144	0.61	-0.6
159,754	-	yadB	b0144	0.61	+0.6
159,770	+	yadB	b0144	0.63	+0.1
159,770	+	yadB	b0144	0.63	+0.2
159,803	+	yadB	b0144	0.67	+0.3
159,808	+	yadB	b0144	0.67	+0.2
159,905	-	yadB	b0144	0.78	+0.5
159,947	+	yadB	b0144	0.82	-0.2
160,046	+				+0.2
160,068	+				+0.3
160,068	-				-1.1
160,068	-				+0.1
160,070	-				+0.6
160,078	+				+0.8
160,078	+				-0.2