Strain Fitness in Escherichia coli BW25113 around b0028
Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 25,846 | - | -2.4 | |||
| 25,846 | - | -3.8 | |||
| 25,918 | + | fkpB | b0028 | 0.20 | +0.5 |
| 26,033 | + | fkpB | b0028 | 0.46 | +0.0 |
| 26,142 | + | fkpB | b0028 | 0.70 | +0.1 |
| 26,145 | - | fkpB | b0028 | 0.71 | -2.7 |
| 26,145 | - | fkpB | b0028 | 0.71 | +0.1 |
| 26,147 | + | fkpB | b0028 | 0.71 | -0.1 |
| 26,190 | - | fkpB | b0028 | 0.81 | -2.5 |
| 26,235 | + | -0.3 |
Or see this region's nucleotide sequence