Strain Fitness in Escherichia coli BW25113 around b4108

Experiment: Phosphomycin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.001 mg/ml
4,323,500	+	phnB	b4107	0.40	-0.3
4,323,544	-	phnB	b4107	0.50	-0.4
4,323,556	-	phnB	b4107	0.53	+0.0
4,323,556	-	phnB	b4107	0.53	+0.6
4,323,568	+	phnB	b4107	0.56	+0.0
4,323,613	+	phnB	b4107	0.66	-0.6
4,323,686	-	phnB	b4107	0.82	-0.6
4,323,686	-	phnB	b4107	0.82	-0.5
4,323,686	-	phnB	b4107	0.82	-0.1
4,323,769	-				-0.1
4,323,769	-				-0.1
4,323,776	+				+0.1
4,323,826	-				-0.6
4,323,860	-				-0.2
4,324,091	+				-0.7
4,324,091	+				-0.5
4,324,101	+				-0.2
4,324,323	+				+1.2
4,324,392	+				-0.3
4,324,392	+				+0.1
4,324,414	+				+0.0
4,324,506	-	phnA	b4108	0.25	+0.3
4,324,506	-	phnA	b4108	0.25	+0.3
4,324,571	-	phnA	b4108	0.44	+0.4
4,324,571	-	phnA	b4108	0.44	-0.1
4,324,607	-	phnA	b4108	0.55	+0.4
4,324,654	+	phnA	b4108	0.69	-0.1
4,324,692	+	phnA	b4108	0.80	-0.0
4,324,700	-	phnA	b4108	0.83	-1.1
4,324,700	-	phnA	b4108	0.83	+1.0
4,324,701	-	phnA	b4108	0.83	+1.2
4,324,701	-	phnA	b4108	0.83	-0.7
4,324,711	+	phnA	b4108	0.86	-0.0
4,324,719	-	phnA	b4108	0.88	-0.2
4,324,741	-				+0.7
4,324,751	-				-0.4
4,324,751	-				+0.7
4,324,751	-				+0.2
4,324,751	-				-0.2
4,324,751	-				+0.2
4,324,755	-				+1.4
4,324,755	-				-0.4
4,324,795	-				+0.3
4,324,858	+				+0.9
4,324,861	+				+0.7
4,324,867	-				-0.2
4,325,013	+				-0.2
4,325,093	+				-0.3
4,325,160	+				-0.6
4,325,160	+				-2.2
4,325,163	+				-0.8
4,325,163	+				-0.8
4,325,167	-				-0.5
4,325,167	-				-0.1
4,325,167	-				+0.1
4,325,167	-				+0.6
4,325,167	-				+0.5
4,325,167	-				+0.9
4,325,167	-				+0.5
4,325,168	-				-0.5
4,325,168	-				-0.0
4,325,168	-				+0.3
4,325,168	-				+0.5
4,325,170	-				-0.3
4,325,171	+				-0.9
4,325,175	+				-0.5
4,325,177	-				+0.3
4,325,179	-				-0.1
4,325,181	-				+0.3
4,325,181	-				+0.8
4,325,181	-				-0.7
4,325,181	-				-0.1
4,325,181	-				-1.4
4,325,181	-				-0.2
4,325,181	-				+0.4
4,325,183	-				+0.6
4,325,183	-				+0.0
4,325,183	-				+0.4
4,325,183	-				-0.4
4,325,185	+				-0.4
4,325,188	-				+0.3
4,325,188	-				+0.6
4,325,212	-				-1.0
4,325,212	-				+1.1
4,325,213	-				+0.5
4,325,214	-				+0.1
4,325,224	-				+0.2
4,325,226	+				+0.4
4,325,226	+				+0.5
4,325,253	+				-0.0
4,325,253	+				-0.1
4,325,260	+				+0.2
4,325,261	-				-0.4
4,325,261	-				-0.2
4,325,292	-				-0.5
4,325,292	-				-1.1
4,325,297	-				+0.7
4,325,363	+				-0.5
4,325,394	-	yjdA	b4109	0.11	+0.7
4,325,394	-	yjdA	b4109	0.11	-0.5
4,325,407	+	yjdA	b4109	0.11	-3.0
4,325,407	+	yjdA	b4109	0.11	-0.2
4,325,411	+	yjdA	b4109	0.11	-0.5
4,325,419	-	yjdA	b4109	0.12	-0.6
4,325,422	-	yjdA	b4109	0.12	-0.4
4,325,425	-	yjdA	b4109	0.12	-0.1
4,325,426	-	yjdA	b4109	0.12	+0.1
4,325,435	+	yjdA	b4109	0.12	+0.0
4,325,435	+	yjdA	b4109	0.12	-0.8
4,325,436	+	yjdA	b4109	0.12	+0.5
4,325,436	+	yjdA	b4109	0.12	+0.3
4,325,436	-	yjdA	b4109	0.12	+0.6
4,325,437	-	yjdA	b4109	0.13	-0.3
4,325,445	-	yjdA	b4109	0.13	-0.4
4,325,446	+	yjdA	b4109	0.13	-0.5
4,325,446	+	yjdA	b4109	0.13	+0.4
4,325,450	-	yjdA	b4109	0.13	+0.1
4,325,450	-	yjdA	b4109	0.13	+0.1
4,325,454	+	yjdA	b4109	0.13	+0.5
4,325,457	+	yjdA	b4109	0.13	-0.1
4,325,457	+	yjdA	b4109	0.13	+0.1
4,325,457	+	yjdA	b4109	0.13	+0.2
4,325,472	+	yjdA	b4109	0.14	+0.4
4,325,472	+	yjdA	b4109	0.14	-0.2
4,325,472	+	yjdA	b4109	0.14	-0.3
4,325,473	-	yjdA	b4109	0.14	-0.2
4,325,485	-	yjdA	b4109	0.15	-1.8
4,325,487	+	yjdA	b4109	0.15	+0.2
4,325,495	-	yjdA	b4109	0.15	+0.1
4,325,498	+	yjdA	b4109	0.15	+0.2
4,325,510	-	yjdA	b4109	0.16	-0.1
4,325,510	-	yjdA	b4109	0.16	-0.5
4,325,515	-	yjdA	b4109	0.16	-0.4
4,325,525	-	yjdA	b4109	0.16	-0.4
4,325,585	+	yjdA	b4109	0.19	+0.2
4,325,587	+	yjdA	b4109	0.19	-0.2
4,325,587	+	yjdA	b4109	0.19	+0.6
4,325,595	+	yjdA	b4109	0.20	+0.7
4,325,595	+	yjdA	b4109	0.20	-0.1
4,325,595	-	yjdA	b4109	0.20	+1.0
4,325,595	-	yjdA	b4109	0.20	+0.3
4,325,595	-	yjdA	b4109	0.20	-0.6
4,325,606	-	yjdA	b4109	0.20	-0.3
4,325,610	+	yjdA	b4109	0.20	+0.6
4,325,625	-	yjdA	b4109	0.21	+1.8
4,325,625	-	yjdA	b4109	0.21	-0.0
4,325,630	-	yjdA	b4109	0.21	+0.1
4,325,632	-	yjdA	b4109	0.21	+0.0
4,325,633	+	yjdA	b4109	0.21	-0.1
4,325,633	+	yjdA	b4109	0.21	-0.0
4,325,635	+	yjdA	b4109	0.21	+0.2
4,325,635	+	yjdA	b4109	0.21	+0.7
4,325,643	-	yjdA	b4109	0.22	+0.4
4,325,673	+	yjdA	b4109	0.23	+0.1
4,325,694	-	yjdA	b4109	0.24	-0.2
4,325,721	+	yjdA	b4109	0.25	+1.3
4,325,730	-	yjdA	b4109	0.26	+0.7
4,325,730	-	yjdA	b4109	0.26	+0.5
4,325,731	-	yjdA	b4109	0.26	-0.1
4,325,743	+	yjdA	b4109	0.26	+0.2