Strain Fitness in Escherichia coli BW25113 around b2685

Experiment: Nalidixic 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.006 mg/ml
2,808,515	+	ygaH	b2683	0.44	+1.7
2,808,517	-	ygaH	b2683	0.45	-1.9
2,808,533	+	ygaH	b2683	0.50	+0.8
2,808,533	+	ygaH	b2683	0.50	+3.2
2,808,534	-	ygaH	b2683	0.50	+1.1
2,808,534	-	ygaH	b2683	0.50	+0.6
2,808,560	-	ygaH	b2683	0.58	+0.3
2,808,565	-				+1.9
2,808,645	+	ygaH	b2683	0.83	+4.8
2,808,645	+	ygaH	b2683	0.83	+5.4
2,808,645	+	ygaH	b2683	0.83	+6.0
2,808,648	-	ygaH	b2683	0.84	-0.4
2,808,655	+	ygaH	b2683	0.86	+3.4
2,808,658	-	ygaH	b2683	0.87	+0.0
2,808,660	-	ygaH	b2683	0.88	+0.9
2,808,662	+	ygaH	b2683	0.88	+2.8
2,808,662	+	ygaH	b2683	0.88	+3.5
2,808,671	-				+0.4
2,808,876	-	mprA	b2684	0.16	-1.7
2,809,004	-	mprA	b2684	0.40	-2.3
2,809,100	+	mprA	b2684	0.58	+10.2
2,809,100	+	mprA	b2684	0.58	+10.3
2,809,107	+	mprA	b2684	0.59	+9.7
2,809,200	+	mprA	b2684	0.77	+9.9
2,809,287	+				+8.4
2,809,433	-				+0.7
2,809,497	+				-2.2
2,809,497	+				-1.5
2,809,546	-				-1.9
2,809,548	-				-2.6
2,809,748	-	emrA	b2685	0.25	-2.1
2,809,748	-	emrA	b2685	0.25	-3.3
2,809,806	-	emrA	b2685	0.30	-1.9
2,809,931	-	emrA	b2685	0.41	-2.2
2,810,041	+	emrA	b2685	0.50	-1.0
2,810,097	+	emrA	b2685	0.55	-1.4
2,810,097	+	emrA	b2685	0.55	-1.6
2,810,097	+	emrA	b2685	0.55	-1.2
2,810,100	-	emrA	b2685	0.55	-2.8
2,810,100	-	emrA	b2685	0.55	-2.2
2,810,103	-	emrA	b2685	0.56	-2.4
2,810,127	-	emrA	b2685	0.58	-2.2
2,810,147	-	emrA	b2685	0.60	-1.8
2,810,204	-	emrA	b2685	0.64	-1.3
2,810,320	+	emrA	b2685	0.74	-2.4
2,810,339	-	emrA	b2685	0.76	-2.4
2,810,417	-	emrA	b2685	0.83	-2.0
2,810,443	-	emrA	b2685	0.85	-2.1
2,810,480	+	emrA	b2685	0.88	-1.6
2,810,482	-	emrA	b2685	0.88	-0.7
2,810,482	-	emrA	b2685	0.88	-2.8
2,810,503	+	emrA	b2685	0.90	-2.3
2,810,533	+				-1.8
2,810,543	+				-1.5
2,810,543	+				-0.7
2,810,549	-				-2.6
2,810,621	+				-1.0
2,810,633	+				-1.0
2,810,716	+				-1.7
2,810,716	+				-2.7
2,810,724	-				-1.2
2,810,763	-				-1.7
2,810,764	+				-2.0
2,810,764	+				-2.0
2,810,921	+	emrB	b2686	0.18	-1.2
2,811,019	-	emrB	b2686	0.25	-1.1
2,811,019	-	emrB	b2686	0.25	-1.5
2,811,034	+	emrB	b2686	0.26	-2.1
2,811,034	+	emrB	b2686	0.26	-2.9
2,811,151	-	emrB	b2686	0.33	-1.3
2,811,196	-	emrB	b2686	0.36	-1.2
2,811,196	-	emrB	b2686	0.36	-2.2
2,811,310	+	emrB	b2686	0.44	-1.1
2,811,431	-	emrB	b2686	0.52	-1.7
2,811,436	-	emrB	b2686	0.52	-1.4
2,811,505	-	emrB	b2686	0.56	-1.5
2,811,507	-	emrB	b2686	0.56	-1.4
2,811,507	-	emrB	b2686	0.56	-2.3
2,811,528	+				+0.7
2,811,581	-	emrB	b2686	0.61	-2.2