Strain Fitness in Escherichia coli BW25113 around b2568
Experiment: Nalidixic 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,701,692 | - | rnc | b2567 | 0.42 | -2.5 |
2,702,009 | - | rnc | b2567 | 0.89 | -3.7 |
2,702,100 | - | +0.1 | |||
2,702,134 | - | +0.4 | |||
2,702,144 | - | +0.3 | |||
2,702,144 | - | +0.4 | |||
2,702,147 | - | +0.4 | |||
2,702,147 | - | -0.1 | |||
2,702,164 | - | +0.1 | |||
2,702,164 | - | +0.0 | |||
2,702,191 | - | +0.7 | |||
2,702,191 | - | -1.2 | |||
2,702,191 | - | +0.3 | |||
2,702,229 | - | +0.3 | |||
2,702,303 | + | +0.2 | |||
2,702,368 | + | -0.6 | |||
2,702,368 | + | -0.3 | |||
2,702,439 | - | -3.1 | |||
2,702,448 | - | -2.2 | |||
2,702,448 | - | -2.9 | |||
2,703,342 | - | +0.7 | |||
2,703,342 | - | -1.1 | |||
2,703,413 | - | -0.6 | |||
2,703,702 | - | lepA | b2569 | 0.20 | +0.5 |
2,703,911 | - | lepA | b2569 | 0.31 | +0.5 |
2,703,930 | - | lepA | b2569 | 0.32 | +0.4 |
2,703,932 | - | lepA | b2569 | 0.33 | +0.9 |
2,704,000 | - | lepA | b2569 | 0.36 | +0.2 |
2,704,055 | + | lepA | b2569 | 0.39 | +0.1 |
2,704,089 | + | lepA | b2569 | 0.41 | +0.7 |
2,704,109 | - | lepA | b2569 | 0.42 | +1.5 |
2,704,109 | - | lepA | b2569 | 0.42 | +1.6 |
2,704,110 | - | lepA | b2569 | 0.42 | +0.9 |
2,704,169 | + | lepA | b2569 | 0.46 | -1.2 |
2,704,194 | - | lepA | b2569 | 0.47 | +1.7 |
2,704,250 | - | lepA | b2569 | 0.50 | +1.1 |
Or see this region's nucleotide sequence