Strain Fitness in Escherichia coli BW25113 around b1498

Experiment: Nalidixic 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.006 mg/ml
1,578,024	-	b1497	b1497	0.32	-1.7
1,578,448	-	b1497	b1497	0.68	-0.9
1,578,457	-	b1497	b1497	0.69	-1.7
1,578,503	+	b1497	b1497	0.73	-0.9
1,578,625	-	b1497	b1497	0.84	-0.2
1,578,702	-				-0.1
1,578,801	+				-1.1
1,578,801	+				-1.2
1,578,806	+				-0.4
1,578,822	-				+0.7
1,578,961	-				-0.1
1,578,973	-				-0.6
1,578,981	-				-0.2
1,579,014	-				-0.6
1,579,049	-	b1498	b1498	0.11	-0.7
1,579,049	-	b1498	b1498	0.11	+0.6
1,579,060	+	b1498	b1498	0.12	-1.0
1,579,063	-	b1498	b1498	0.12	-0.8
1,579,063	-	b1498	b1498	0.12	-0.0
1,579,123	+	b1498	b1498	0.15	-1.2
1,579,125	+	b1498	b1498	0.15	-0.2
1,579,133	-	b1498	b1498	0.16	-0.4
1,579,133	-	b1498	b1498	0.16	+0.4
1,579,142	+	b1498	b1498	0.16	-1.2
1,579,143	-	b1498	b1498	0.16	-0.4
1,579,154	-	b1498	b1498	0.17	+0.1
1,579,154	-	b1498	b1498	0.17	+1.2
1,579,156	-	b1498	b1498	0.17	-2.8
1,579,226	-	b1498	b1498	0.21	-0.3
1,579,270	-	b1498	b1498	0.24	-0.2
1,579,270	-	b1498	b1498	0.24	-0.4
1,579,275	+	b1498	b1498	0.24	-1.1
1,579,280	+	b1498	b1498	0.25	-1.2
1,579,301	-	b1498	b1498	0.26	+0.6
1,579,335	+	b1498	b1498	0.28	-1.2
1,579,456	-	b1498	b1498	0.35	-3.2
1,579,457	+	b1498	b1498	0.35	+0.6
1,579,457	+	b1498	b1498	0.35	-0.7
1,579,478	+	b1498	b1498	0.36	+0.2
1,579,486	+	b1498	b1498	0.37	-0.4
1,579,486	+	b1498	b1498	0.37	+0.1
1,579,496	+	b1498	b1498	0.37	-0.3
1,579,539	+	b1498	b1498	0.40	-2.1
1,579,577	+	b1498	b1498	0.42	+0.0
1,579,669	+	b1498	b1498	0.48	+0.2
1,579,669	+	b1498	b1498	0.48	-0.3
1,579,701	+	b1498	b1498	0.50	+0.2
1,579,718	-	b1498	b1498	0.51	-0.4
1,579,737	+	b1498	b1498	0.52	-0.3
1,579,747	+	b1498	b1498	0.52	+0.0
1,579,755	-	b1498	b1498	0.53	-0.8
1,579,770	+	b1498	b1498	0.54	-0.4
1,579,828	+	b1498	b1498	0.57	-0.1
1,579,841	+	b1498	b1498	0.58	-0.2
1,579,844	-	b1498	b1498	0.58	-0.2
1,579,907	+	b1498	b1498	0.62	-0.5
1,579,931	+	b1498	b1498	0.63	+0.2
1,579,942	+	b1498	b1498	0.64	-0.5
1,579,961	+	b1498	b1498	0.65	+0.7
1,579,980	-	b1498	b1498	0.66	-3.0
1,580,024	-	b1498	b1498	0.69	-3.8
1,580,063	+	b1498	b1498	0.71	-0.8
1,580,078	-	b1498	b1498	0.72	-1.2
1,580,112	-	b1498	b1498	0.74	-0.6
1,580,124	-	b1498	b1498	0.75	-0.4
1,580,147	-	b1498	b1498	0.76	-1.8
1,580,172	-	b1498	b1498	0.78	-1.9
1,580,174	+	b1498	b1498	0.78	-0.3
1,580,186	+	b1498	b1498	0.78	-0.4
1,580,201	-	b1498	b1498	0.79	-0.8
1,580,281	-	b1498	b1498	0.84	-0.2
1,580,352	+	b1498	b1498	0.88	-0.5
1,580,383	+				-1.3
1,580,454	-				+0.4
1,580,497	+				-1.7
1,580,525	-				-1.8
1,580,539	-				-1.4
1,580,549	-				+0.1
1,580,918	-				-2.2
1,580,924	+				-1.2
1,580,978	+				-1.7
1,581,015	+				-3.7
1,581,015	+				+0.2
1,581,085	-	ydeO	b1499	0.18	-3.2
1,581,214	-	ydeO	b1499	0.35	-1.4