Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4567 and GFF4568 are separated by 75 nucleotides GFF4568 and GFF4569 are separated by 31 nucleotides
GFF4567 - Chaperone protein DnaK, at 352,747 to 354,426
GFF4567
GFF4568 - putative cytoplasmic protein, at 354,502 to 355,740
GFF4568
GFF4569 - Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1), at 355,772 to 356,707
GFF4569
Position (kb) 354
355
356 Strain fitness (log2 ratio) -1
0
1
2 at 353.727 kb on - strand, within GFF4567 at 353.727 kb on - strand, within GFF4567 at 353.828 kb on + strand, within GFF4567 at 353.833 kb on - strand, within GFF4567 at 353.944 kb on - strand, within GFF4567 at 354.030 kb on + strand, within GFF4567 at 354.031 kb on - strand, within GFF4567 at 354.036 kb on + strand, within GFF4567 at 354.036 kb on + strand, within GFF4567 at 354.145 kb on + strand, within GFF4567 at 354.519 kb on - strand at 354.883 kb on - strand, within GFF4568 at 354.903 kb on + strand, within GFF4568 at 355.108 kb on - strand, within GFF4568 at 355.149 kb on + strand, within GFF4568 at 355.263 kb on - strand, within GFF4568 at 355.389 kb on - strand, within GFF4568 at 355.391 kb on + strand, within GFF4568 at 355.432 kb on - strand, within GFF4568 at 355.566 kb on - strand, within GFF4568 at 355.602 kb on + strand, within GFF4568 at 355.603 kb on - strand, within GFF4568 at 355.669 kb on + strand at 355.681 kb on - strand at 355.782 kb on + strand at 355.783 kb on - strand at 355.872 kb on + strand, within GFF4569 at 355.902 kb on + strand, within GFF4569 at 356.038 kb on + strand, within GFF4569 at 356.129 kb on - strand, within GFF4569 at 356.206 kb on - strand, within GFF4569 at 356.237 kb on - strand, within GFF4569 at 356.285 kb on - strand, within GFF4569 at 356.690 kb on - strand at 356.720 kb on + strand at 356.728 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 353,727 - GFF4567 0.58 -1.4 353,727 - GFF4567 0.58 +1.7 353,828 + GFF4567 0.64 -0.1 353,833 - GFF4567 0.65 -0.4 353,944 - GFF4567 0.71 -0.3 354,030 + GFF4567 0.76 +0.3 354,031 - GFF4567 0.76 -0.7 354,036 + GFF4567 0.77 +1.0 354,036 + GFF4567 0.77 -0.0 354,145 + GFF4567 0.83 +0.5 354,519 - +0.3 354,883 - GFF4568 0.31 +1.1 354,903 + GFF4568 0.32 +0.0 355,108 - GFF4568 0.49 +1.0 355,149 + GFF4568 0.52 +0.2 355,263 - GFF4568 0.61 -0.7 355,389 - GFF4568 0.72 -0.3 355,391 + GFF4568 0.72 +0.6 355,432 - GFF4568 0.75 -0.1 355,566 - GFF4568 0.86 -0.3 355,602 + GFF4568 0.89 +0.2 355,603 - GFF4568 0.89 +0.4 355,669 + -0.5 355,681 - -0.6 355,782 + +0.2 355,783 - +0.9 355,872 + GFF4569 0.11 -0.3 355,902 + GFF4569 0.14 +0.0 356,038 + GFF4569 0.28 +1.8 356,129 - GFF4569 0.38 -0.7 356,206 - GFF4569 0.46 -0.4 356,237 - GFF4569 0.50 -0.1 356,285 - GFF4569 0.55 +0.5 356,690 - +0.2 356,720 + +0.6 356,728 - +2.4
Or see this region's nucleotide sequence