Experiment: Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3662 and Atu3663 are separated by 226 nucleotides Atu3663 and Atu3664 are separated by 174 nucleotides
Atu3662: Atu3662 - hypothetical protein, at 710,360 to 711,970
Atu3662
Atu3663: Atu3663 - hypothetical protein, at 712,197 to 712,619
Atu3663
Atu3664: Atu3664 - epoxide hydrolase, at 712,794 to 713,765
Atu3664
Position (kb) 712
713 Strain fitness (log2 ratio) -2
-1
0
1
2 at 711.206 kb on + strand, within Atu3662 at 711.259 kb on - strand, within Atu3662 at 711.297 kb on + strand, within Atu3662 at 711.305 kb on - strand, within Atu3662 at 711.309 kb on + strand, within Atu3662 at 711.317 kb on - strand, within Atu3662 at 711.352 kb on + strand, within Atu3662 at 711.362 kb on + strand, within Atu3662 at 711.430 kb on + strand, within Atu3662 at 711.430 kb on + strand, within Atu3662 at 711.430 kb on + strand, within Atu3662 at 711.438 kb on - strand, within Atu3662 at 711.438 kb on - strand, within Atu3662 at 711.453 kb on - strand, within Atu3662 at 711.457 kb on + strand, within Atu3662 at 711.493 kb on + strand, within Atu3662 at 711.501 kb on - strand, within Atu3662 at 711.501 kb on - strand, within Atu3662 at 711.565 kb on + strand, within Atu3662 at 711.668 kb on - strand, within Atu3662 at 711.679 kb on + strand, within Atu3662 at 711.687 kb on - strand, within Atu3662 at 711.716 kb on - strand, within Atu3662 at 711.730 kb on + strand, within Atu3662 at 711.756 kb on - strand, within Atu3662 at 711.767 kb on + strand, within Atu3662 at 711.795 kb on - strand, within Atu3662 at 711.795 kb on - strand, within Atu3662 at 711.813 kb on - strand at 711.883 kb on + strand at 711.909 kb on - strand at 711.920 kb on - strand at 711.960 kb on - strand at 711.960 kb on - strand at 712.046 kb on + strand at 712.115 kb on + strand at 712.169 kb on + strand at 712.180 kb on + strand at 712.237 kb on - strand at 712.548 kb on - strand, within Atu3663 at 712.560 kb on - strand, within Atu3663 at 712.580 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days remove 711,206 + Atu3662 0.53 -0.5 711,259 - Atu3662 0.56 -0.5 711,297 + Atu3662 0.58 -1.2 711,305 - Atu3662 0.59 +0.4 711,309 + Atu3662 0.59 +1.2 711,317 - Atu3662 0.59 -0.3 711,352 + Atu3662 0.62 +0.6 711,362 + Atu3662 0.62 +0.6 711,430 + Atu3662 0.66 -0.4 711,430 + Atu3662 0.66 -0.4 711,430 + Atu3662 0.66 +0.7 711,438 - Atu3662 0.67 -1.3 711,438 - Atu3662 0.67 -0.8 711,453 - Atu3662 0.68 +0.4 711,457 + Atu3662 0.68 +0.3 711,493 + Atu3662 0.70 -0.4 711,501 - Atu3662 0.71 -0.1 711,501 - Atu3662 0.71 +0.6 711,565 + Atu3662 0.75 +1.1 711,668 - Atu3662 0.81 +0.8 711,679 + Atu3662 0.82 +0.6 711,687 - Atu3662 0.82 -0.3 711,716 - Atu3662 0.84 -0.7 711,730 + Atu3662 0.85 -1.5 711,756 - Atu3662 0.87 -0.8 711,767 + Atu3662 0.87 +1.8 711,795 - Atu3662 0.89 +1.0 711,795 - Atu3662 0.89 -0.0 711,813 - -0.2 711,883 + -0.5 711,909 - +1.3 711,920 - +0.4 711,960 - +1.8 711,960 - +1.4 712,046 + -0.2 712,115 + +0.1 712,169 + -0.1 712,180 + -0.5 712,237 - -1.8 712,548 - Atu3663 0.83 +0.2 712,560 - Atu3663 0.86 -1.9 712,580 - +0.3
Or see this region's nucleotide sequence