Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4248 and GFF4249 are separated by 11 nucleotides GFF4249 and GFF4250 are separated by 77 nucleotides GFF4250 and GFF4251 are separated by 292 nucleotides
GFF4248 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 28,772 to 31,060
GFF4248
GFF4249 - Cu(I)-responsive transcriptional regulator, at 31,072 to 31,536
GFF4249
GFF4250 - Putative copper chaperone, at 31,614 to 31,808
GFF4250
GFF4251 - Putative metabolite transport protein, at 32,101 to 33,354
GFF4251
Position (kb)
31
32 Strain fitness (log2 ratio)
-1
0
1 at 30.302 kb on + strand, within GFF4248 at 30.302 kb on + strand, within GFF4248 at 30.303 kb on - strand, within GFF4248 at 30.303 kb on - strand, within GFF4248 at 30.347 kb on + strand, within GFF4248 at 30.349 kb on + strand, within GFF4248 at 30.350 kb on - strand, within GFF4248 at 30.429 kb on - strand, within GFF4248 at 30.514 kb on - strand, within GFF4248 at 30.780 kb on + strand, within GFF4248 at 30.781 kb on - strand, within GFF4248 at 30.784 kb on - strand, within GFF4248 at 30.818 kb on - strand, within GFF4248 at 30.915 kb on + strand at 30.936 kb on + strand at 31.093 kb on - strand at 31.204 kb on - strand, within GFF4249 at 31.268 kb on + strand, within GFF4249 at 31.268 kb on + strand, within GFF4249 at 31.534 kb on + strand at 31.534 kb on + strand at 31.548 kb on - strand at 31.692 kb on - strand, within GFF4250 at 31.806 kb on + strand at 31.807 kb on - strand at 31.976 kb on - strand at 31.996 kb on + strand at 32.012 kb on - strand at 32.096 kb on + strand at 32.096 kb on + strand at 32.100 kb on + strand at 32.100 kb on + strand at 32.101 kb on - strand at 32.101 kb on - strand at 32.101 kb on - strand at 32.101 kb on - strand at 32.104 kb on + strand at 32.105 kb on - strand at 32.204 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 30,302 + GFF4248 0.67 +1.2 30,302 + GFF4248 0.67 +0.7 30,303 - GFF4248 0.67 -0.1 30,303 - GFF4248 0.67 -0.1 30,347 + GFF4248 0.69 -0.2 30,349 + GFF4248 0.69 +0.2 30,350 - GFF4248 0.69 -0.3 30,429 - GFF4248 0.72 -0.0 30,514 - GFF4248 0.76 -0.3 30,780 + GFF4248 0.88 -0.2 30,781 - GFF4248 0.88 -0.2 30,784 - GFF4248 0.88 -0.1 30,818 - GFF4248 0.89 +0.2 30,915 + -0.9 30,936 + +0.1 31,093 - -0.1 31,204 - GFF4249 0.28 -0.1 31,268 + GFF4249 0.42 -0.1 31,268 + GFF4249 0.42 -1.1 31,534 + -0.3 31,534 + -0.2 31,548 - -1.0 31,692 - GFF4250 0.40 -0.2 31,806 + +0.5 31,807 - +0.8 31,976 - -0.0 31,996 + -0.3 32,012 - +0.3 32,096 + -0.8 32,096 + +0.1 32,100 + -1.5 32,100 + -0.6 32,101 - -0.0 32,101 - +0.4 32,101 - -0.1 32,101 - -0.1 32,104 + +1.4 32,105 - -0.9 32,204 + -0.7
Or see this region's nucleotide sequence