Experiment: 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF330 and GFF331 are separated by 42 nucleotides GFF331 and GFF332 are separated by 481 nucleotides
GFF330 - Transposase, at 45,500 to 46,441
GFF330
GFF331 - Permease of the drug/metabolite transporter (DMT) superfamily, at 46,484 to 47,431
GFF331
GFF332 - Mg(2+) transport ATPase protein C, at 47,913 to 48,590
GFF332
Position (kb) 46
47
48 Strain fitness (log2 ratio) -2
-1
0
1 at 45.606 kb on + strand, within GFF330 at 45.725 kb on + strand, within GFF330 at 45.728 kb on - strand, within GFF330 at 45.728 kb on - strand, within GFF330 at 45.728 kb on - strand, within GFF330 at 45.731 kb on + strand, within GFF330 at 45.731 kb on + strand, within GFF330 at 45.732 kb on - strand, within GFF330 at 45.739 kb on + strand, within GFF330 at 45.740 kb on - strand, within GFF330 at 45.833 kb on - strand, within GFF330 at 45.866 kb on + strand, within GFF330 at 45.970 kb on - strand, within GFF330 at 45.970 kb on - strand, within GFF330 at 46.046 kb on - strand, within GFF330 at 46.046 kb on - strand, within GFF330 at 46.047 kb on + strand, within GFF330 at 46.048 kb on - strand, within GFF330 at 46.048 kb on - strand, within GFF330 at 46.251 kb on + strand, within GFF330 at 46.251 kb on + strand, within GFF330 at 46.251 kb on + strand, within GFF330 at 46.302 kb on + strand, within GFF330 at 46.313 kb on - strand, within GFF330 at 46.315 kb on - strand, within GFF330 at 46.354 kb on + strand at 46.355 kb on - strand at 46.400 kb on - strand at 46.574 kb on - strand at 46.574 kb on - strand at 46.574 kb on - strand at 46.580 kb on - strand, within GFF331 at 46.634 kb on + strand, within GFF331 at 46.680 kb on + strand, within GFF331 at 46.776 kb on + strand, within GFF331 at 46.776 kb on + strand, within GFF331 at 46.810 kb on + strand, within GFF331 at 46.811 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 47.051 kb on - strand, within GFF331 at 47.218 kb on + strand, within GFF331 at 47.261 kb on + strand, within GFF331 at 47.261 kb on + strand, within GFF331 at 47.262 kb on - strand, within GFF331 at 47.308 kb on - strand, within GFF331 at 47.431 kb on + strand at 47.628 kb on - strand at 47.751 kb on - strand at 47.869 kb on - strand at 47.993 kb on + strand, within GFF332 at 47.993 kb on + strand, within GFF332 at 47.994 kb on - strand, within GFF332 at 48.302 kb on - strand, within GFF332 at 48.341 kb on + strand, within GFF332
Per-strain Table
Position Strand Gene LocusTag Fraction 6F2_phage 15 MOI remove 45,606 + GFF330 0.11 -0.3 45,725 + GFF330 0.24 +0.1 45,728 - GFF330 0.24 -0.4 45,728 - GFF330 0.24 -0.2 45,728 - GFF330 0.24 -0.9 45,731 + GFF330 0.25 +0.2 45,731 + GFF330 0.25 +0.1 45,732 - GFF330 0.25 -0.1 45,739 + GFF330 0.25 -0.5 45,740 - GFF330 0.25 +0.1 45,833 - GFF330 0.35 +0.1 45,866 + GFF330 0.39 -1.3 45,970 - GFF330 0.50 +0.2 45,970 - GFF330 0.50 +0.5 46,046 - GFF330 0.58 -1.1 46,046 - GFF330 0.58 -1.8 46,047 + GFF330 0.58 -1.4 46,048 - GFF330 0.58 +0.5 46,048 - GFF330 0.58 +0.2 46,251 + GFF330 0.80 -1.0 46,251 + GFF330 0.80 +0.0 46,251 + GFF330 0.80 -0.4 46,302 + GFF330 0.85 -1.2 46,313 - GFF330 0.86 +0.9 46,315 - GFF330 0.87 -0.3 46,354 + +1.3 46,355 - +0.3 46,400 - -0.1 46,574 - +0.7 46,574 - -0.2 46,574 - -0.2 46,580 - GFF331 0.10 +0.5 46,634 + GFF331 0.16 +0.2 46,680 + GFF331 0.21 -1.1 46,776 + GFF331 0.31 -0.7 46,776 + GFF331 0.31 -0.8 46,810 + GFF331 0.34 -0.0 46,811 - GFF331 0.34 -0.3 46,985 - GFF331 0.53 +0.2 46,985 - GFF331 0.53 +0.3 46,985 - GFF331 0.53 -0.8 46,985 - GFF331 0.53 -0.3 47,051 - GFF331 0.60 +0.3 47,218 + GFF331 0.77 -0.6 47,261 + GFF331 0.82 -1.8 47,261 + GFF331 0.82 -0.2 47,262 - GFF331 0.82 +0.4 47,308 - GFF331 0.87 +0.0 47,431 + +0.2 47,628 - -0.4 47,751 - +0.8 47,869 - -0.2 47,993 + GFF332 0.12 -0.2 47,993 + GFF332 0.12 -0.4 47,994 - GFF332 0.12 -0.2 48,302 - GFF332 0.57 +0.3 48,341 + GFF332 0.63 -0.9
Or see this region's nucleotide sequence