Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF969 and GFF970 are separated by 97 nucleotides GFF970 and GFF971 are separated by 330 nucleotides GFF971 and GFF972 are separated by 10 nucleotides GFF972 and GFF973 are separated by 488 nucleotides
GFF969 - FIG007491: hypothetical protein YeeN, at 156,017 to 156,733
GFF969
GFF970 - hypothetical protein, at 156,831 to 156,962
GFF970
GFF971 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 157,293 to 158,918
GFF971
GFF972 - FIG01045803: hypothetical protein, at 158,929 to 159,186
GFF972
GFF973 - FIG074102: hypothetical protein, at 159,675 to 160,283
GFF973
Position (kb) 157
158
159 Strain fitness (log2 ratio) -1
0
1 at 156.484 kb on - strand, within GFF969 at 157.262 kb on - strand at 157.277 kb on + strand at 157.456 kb on + strand, within GFF971 at 157.456 kb on + strand, within GFF971 at 157.457 kb on - strand, within GFF971 at 157.457 kb on - strand, within GFF971 at 157.616 kb on - strand, within GFF971 at 157.616 kb on - strand, within GFF971 at 157.672 kb on - strand, within GFF971 at 157.672 kb on - strand, within GFF971 at 157.769 kb on + strand, within GFF971 at 157.770 kb on - strand, within GFF971 at 157.777 kb on - strand, within GFF971 at 157.980 kb on - strand, within GFF971 at 158.067 kb on - strand, within GFF971 at 158.197 kb on + strand, within GFF971 at 158.197 kb on + strand, within GFF971 at 158.197 kb on + strand, within GFF971 at 158.394 kb on - strand, within GFF971 at 158.641 kb on - strand, within GFF971 at 158.912 kb on + strand at 158.973 kb on + strand, within GFF972 at 158.973 kb on + strand, within GFF972 at 159.079 kb on - strand, within GFF972 at 159.080 kb on + strand, within GFF972 at 159.154 kb on + strand, within GFF972 at 159.155 kb on - strand, within GFF972 at 159.159 kb on + strand, within GFF972 at 159.159 kb on + strand, within GFF972 at 159.160 kb on - strand, within GFF972 at 159.160 kb on - strand, within GFF972 at 159.211 kb on + strand at 159.217 kb on - strand at 159.355 kb on + strand at 159.455 kb on + strand at 159.455 kb on + strand at 159.468 kb on + strand at 159.495 kb on + strand at 159.496 kb on - strand at 159.611 kb on + strand at 159.745 kb on + strand, within GFF973
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 156,484 - GFF969 0.65 +0.2 157,262 - +0.1 157,277 + -0.1 157,456 + GFF971 0.10 -0.6 157,456 + GFF971 0.10 -1.4 157,457 - GFF971 0.10 -0.1 157,457 - GFF971 0.10 +0.0 157,616 - GFF971 0.20 -0.5 157,616 - GFF971 0.20 -0.2 157,672 - GFF971 0.23 +0.1 157,672 - GFF971 0.23 -1.6 157,769 + GFF971 0.29 -0.7 157,770 - GFF971 0.29 -0.3 157,777 - GFF971 0.30 +0.2 157,980 - GFF971 0.42 +0.4 158,067 - GFF971 0.48 -0.3 158,197 + GFF971 0.56 -0.6 158,197 + GFF971 0.56 +0.1 158,197 + GFF971 0.56 -0.7 158,394 - GFF971 0.68 +0.6 158,641 - GFF971 0.83 -0.1 158,912 + -1.3 158,973 + GFF972 0.17 +0.3 158,973 + GFF972 0.17 -0.7 159,079 - GFF972 0.58 +0.3 159,080 + GFF972 0.59 +0.4 159,154 + GFF972 0.87 +0.4 159,155 - GFF972 0.88 -0.1 159,159 + GFF972 0.89 +0.5 159,159 + GFF972 0.89 -0.3 159,160 - GFF972 0.90 -0.3 159,160 - GFF972 0.90 +0.1 159,211 + +0.6 159,217 - -0.4 159,355 + -0.3 159,455 + -0.4 159,455 + +0.2 159,468 + -1.1 159,495 + -0.3 159,496 - -0.3 159,611 + +0.5 159,745 + GFF973 0.11 +0.5
Or see this region's nucleotide sequence