Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF680 and GFF681 overlap by 8 nucleotides GFF681 and GFF682 are separated by 1 nucleotides GFF682 and GFF683 are separated by 47 nucleotides GFF683 and GFF684 are separated by 332 nucleotides GFF684 and GFF685 are separated by 32 nucleotides
GFF680 - Molybdenum cofactor biosynthesis protein MoaC, at 39,228 to 39,713
GFF680
GFF681 - Molybdenum cofactor biosynthesis protein MoaD, at 39,706 to 39,951
GFF681
GFF682 - Molybdenum cofactor biosynthesis protein MoaE, at 39,953 to 40,405
GFF682
GFF683 - Putative membrane protein, at 40,453 to 41,157
GFF683
GFF684 - Putative membrane protein, at 41,490 to 42,011
GFF684
GFF685 - Putative inner membrane protein, at 42,044 to 42,643
GFF685
Position (kb) 40
41
42 Strain fitness (log2 ratio) -1
0
1 at 39.510 kb on - strand, within GFF680 at 39.635 kb on + strand, within GFF680 at 39.640 kb on + strand, within GFF680 at 39.641 kb on - strand, within GFF680 at 39.712 kb on - strand at 39.745 kb on - strand, within GFF681 at 40.403 kb on + strand at 40.403 kb on + strand at 40.510 kb on + strand at 40.510 kb on + strand at 40.510 kb on + strand at 40.511 kb on - strand at 40.526 kb on - strand, within GFF683 at 40.550 kb on + strand, within GFF683 at 40.585 kb on - strand, within GFF683 at 40.687 kb on - strand, within GFF683 at 40.778 kb on - strand, within GFF683 at 40.844 kb on - strand, within GFF683 at 40.879 kb on - strand, within GFF683 at 41.324 kb on - strand at 41.573 kb on + strand, within GFF684 at 41.804 kb on - strand, within GFF684 at 41.830 kb on + strand, within GFF684
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 39,510 - GFF680 0.58 -1.0 39,635 + GFF680 0.84 -0.2 39,640 + GFF680 0.85 -0.3 39,641 - GFF680 0.85 -0.3 39,712 - -0.3 39,745 - GFF681 0.16 -0.5 40,403 + +0.5 40,403 + -0.4 40,510 + -0.5 40,510 + +0.5 40,510 + +0.2 40,511 - +1.3 40,526 - GFF683 0.10 -0.3 40,550 + GFF683 0.14 +0.1 40,585 - GFF683 0.19 -1.1 40,687 - GFF683 0.33 -1.1 40,778 - GFF683 0.46 -1.0 40,844 - GFF683 0.55 -0.3 40,879 - GFF683 0.60 -0.3 41,324 - +0.6 41,573 + GFF684 0.16 -0.0 41,804 - GFF684 0.60 +1.1 41,830 + GFF684 0.65 -0.4
Or see this region's nucleotide sequence