Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4620 and GFF4621 are separated by 648 nucleotides GFF4621 and GFF4622 are separated by 43 nucleotides GFF4622 and GFF4623 are separated by 285 nucleotides
GFF4620 - Probable DNA recombinase, at 412,172 to 412,738
GFF4620
GFF4621 - putative inner membrane protein, at 413,387 to 413,533
GFF4621
GFF4622 - FIG074102: hypothetical protein, at 413,577 to 414,275
GFF4622
GFF4623 - UDP-galactopyranose mutase (EC 5.4.99.9), at 414,561 to 415,712
GFF4623
Position (kb) 413
414
415 Strain fitness (log2 ratio) -1
0
1 at 412.577 kb on - strand, within GFF4620 at 412.577 kb on - strand, within GFF4620 at 412.625 kb on - strand, within GFF4620 at 412.635 kb on + strand, within GFF4620 at 412.636 kb on - strand, within GFF4620 at 412.636 kb on - strand, within GFF4620 at 412.643 kb on + strand, within GFF4620 at 412.690 kb on + strand at 412.743 kb on - strand at 413.175 kb on - strand at 413.434 kb on + strand, within GFF4621 at 413.434 kb on + strand, within GFF4621 at 413.554 kb on + strand at 413.711 kb on - strand, within GFF4622 at 413.795 kb on + strand, within GFF4622 at 413.932 kb on - strand, within GFF4622 at 414.007 kb on + strand, within GFF4622 at 414.007 kb on + strand, within GFF4622 at 414.173 kb on - strand, within GFF4622 at 414.286 kb on - strand at 414.643 kb on + strand at 415.003 kb on - strand, within GFF4623 at 415.003 kb on - strand, within GFF4623 at 415.025 kb on + strand, within GFF4623
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 412,577 - GFF4620 0.71 +0.1 412,577 - GFF4620 0.71 +0.4 412,625 - GFF4620 0.80 -0.2 412,635 + GFF4620 0.82 -0.5 412,636 - GFF4620 0.82 +0.6 412,636 - GFF4620 0.82 +1.3 412,643 + GFF4620 0.83 -0.0 412,690 + +0.2 412,743 - -0.1 413,175 - +0.0 413,434 + GFF4621 0.32 -1.1 413,434 + GFF4621 0.32 -0.3 413,554 + +0.3 413,711 - GFF4622 0.19 +1.1 413,795 + GFF4622 0.31 +0.3 413,932 - GFF4622 0.51 +0.0 414,007 + GFF4622 0.62 +0.2 414,007 + GFF4622 0.62 +0.5 414,173 - GFF4622 0.85 +0.6 414,286 - -1.0 414,643 + -0.3 415,003 - GFF4623 0.38 -0.0 415,003 - GFF4623 0.38 -0.8 415,025 + GFF4623 0.40 +0.9
Or see this region's nucleotide sequence