Experiment: Br60_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4467 and GFF4468 are separated by 156 nucleotides GFF4468 and GFF4469 are separated by 12 nucleotides GFF4469 and GFF4470 are separated by 78 nucleotides
GFF4467 - Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase, at 250,542 to 251,867
GFF4467
GFF4468 - Putative periplasmic protein, at 252,024 to 252,260
GFF4468
GFF4469 - Putative inner membrane protein, at 252,273 to 252,833
GFF4469
GFF4470 - Putative ATPase involved in DNA repair, at 252,912 to 254,087
GFF4470
Position (kb) 252
253 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 251.046 kb on - strand, within GFF4467 at 251.097 kb on - strand, within GFF4467 at 251.097 kb on - strand, within GFF4467 at 251.237 kb on - strand, within GFF4467 at 251.317 kb on + strand, within GFF4467 at 251.318 kb on - strand, within GFF4467 at 251.376 kb on + strand, within GFF4467 at 251.400 kb on - strand, within GFF4467 at 251.439 kb on - strand, within GFF4467 at 251.470 kb on + strand, within GFF4467 at 251.528 kb on + strand, within GFF4467 at 251.697 kb on - strand, within GFF4467 at 251.822 kb on + strand at 251.984 kb on - strand at 251.986 kb on + strand at 252.112 kb on - strand, within GFF4468 at 252.399 kb on - strand, within GFF4469 at 252.525 kb on - strand, within GFF4469 at 252.528 kb on - strand, within GFF4469 at 252.528 kb on - strand, within GFF4469 at 252.584 kb on - strand, within GFF4469 at 252.610 kb on + strand, within GFF4469 at 252.714 kb on + strand, within GFF4469 at 252.754 kb on + strand, within GFF4469 at 252.767 kb on - strand, within GFF4469 at 252.913 kb on + strand at 253.003 kb on + strand at 253.004 kb on - strand at 253.107 kb on + strand, within GFF4470 at 253.108 kb on - strand, within GFF4470 at 253.233 kb on - strand, within GFF4470 at 253.239 kb on + strand, within GFF4470 at 253.240 kb on - strand, within GFF4470
Per-strain Table
Position Strand Gene LocusTag Fraction Br60_phage 15 MOI remove 251,046 - GFF4467 0.38 +0.3 251,097 - GFF4467 0.42 +0.2 251,097 - GFF4467 0.42 -1.9 251,237 - GFF4467 0.52 -0.1 251,317 + GFF4467 0.58 -1.0 251,318 - GFF4467 0.59 -0.0 251,376 + GFF4467 0.63 -1.6 251,400 - GFF4467 0.65 -0.2 251,439 - GFF4467 0.68 -0.4 251,470 + GFF4467 0.70 -0.2 251,528 + GFF4467 0.74 -0.6 251,697 - GFF4467 0.87 +1.4 251,822 + +0.2 251,984 - -0.8 251,986 + +0.2 252,112 - GFF4468 0.37 -0.3 252,399 - GFF4469 0.22 +0.3 252,525 - GFF4469 0.45 -0.2 252,528 - GFF4469 0.45 -0.2 252,528 - GFF4469 0.45 -0.7 252,584 - GFF4469 0.55 -3.9 252,610 + GFF4469 0.60 -0.1 252,714 + GFF4469 0.79 -0.3 252,754 + GFF4469 0.86 +0.1 252,767 - GFF4469 0.88 +0.3 252,913 + -0.0 253,003 + +0.5 253,004 - +0.1 253,107 + GFF4470 0.17 -0.3 253,108 - GFF4470 0.17 -0.3 253,233 - GFF4470 0.27 +0.1 253,239 + GFF4470 0.28 -0.3 253,240 - GFF4470 0.28 -0.0
Or see this region's nucleotide sequence