Strain Fitness in Agrobacterium fabrum C58 around Atu4404

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,539,053	-		Atu4402	0.77	-0.0
1,539,099	+		Atu4402	0.82	-0.3
1,539,109	+		Atu4402	0.84	-0.1
1,539,117	-		Atu4402	0.85	-0.1
1,539,122	-		Atu4402	0.85	+0.2
1,539,122	-		Atu4402	0.85	+0.8
1,539,143	+		Atu4402	0.88	+0.4
1,539,143	+		Atu4402	0.88	+0.3
1,539,143	+		Atu4402	0.88	+0.5
1,539,151	-		Atu4402	0.89	-0.1
1,539,217	-				+0.1
1,539,219	+				+0.2
1,539,219	+				-0.2
1,539,227	-				+0.4
1,539,227	-				-0.4
1,539,259	+				+0.2
1,539,337	+		Atu4403	0.13	-0.3
1,539,418	+		Atu4403	0.24	-0.2
1,539,418	+		Atu4403	0.24	+0.4
1,539,426	-		Atu4403	0.25	-0.5
1,539,426	-		Atu4403	0.25	-0.1
1,539,630	+		Atu4403	0.52	-0.3
1,539,664	-		Atu4403	0.57	-0.8
1,539,698	+		Atu4403	0.61	-0.4
1,539,698	+		Atu4403	0.61	+0.1
1,539,706	-		Atu4403	0.62	-0.1
1,539,722	+		Atu4403	0.64	+0.7
1,539,798	-		Atu4403	0.75	+0.6
1,539,812	+		Atu4403	0.76	-0.5
1,539,912	+		Atu4403	0.90	+1.3
1,539,914	+				-0.1
1,540,085	+				-0.1
1,540,091	+				+1.1
1,540,105	-		Atu4404	0.10	-0.8
1,540,185	+		Atu4404	0.17	-0.5
1,540,193	+		Atu4404	0.17	-0.7
1,540,399	-		Atu4404	0.35	-0.4
1,540,405	+		Atu4404	0.35	-1.0
1,540,439	+		Atu4404	0.38	+0.2
1,540,488	+		Atu4404	0.42	+0.1
1,540,488	+		Atu4404	0.42	-1.3
1,540,488	+		Atu4404	0.42	-0.6
1,540,496	-		Atu4404	0.43	-0.4
1,540,596	-		Atu4404	0.51	-1.0
1,540,762	+		Atu4404	0.65	-0.5
1,540,762	+		Atu4404	0.65	+0.2
1,540,768	-		Atu4404	0.66	-0.7
1,540,868	+		Atu4404	0.74	+1.3
1,540,868	+		Atu4404	0.74	+1.4
1,541,014	+		Atu4404	0.87	-0.1
1,541,016	+		Atu4404	0.87	+0.0
1,541,016	+		Atu4404	0.87	-0.4
1,541,016	+		Atu4404	0.87	-0.5
1,541,016	+		Atu4404	0.87	-0.5
1,541,016	+		Atu4404	0.87	-0.5
1,541,016	+		Atu4404	0.87	-0.9
1,541,024	-		Atu4404	0.87	+1.5
1,541,024	-		Atu4404	0.87	-0.1
1,541,024	-		Atu4404	0.87	-0.5
1,541,071	+				-0.7
1,541,074	+				+0.2
1,541,076	+				-0.4
1,541,076	+				-0.1
1,541,076	+				-0.1
1,541,084	-				+0.9
1,541,084	-				+1.3
1,541,109	+				-0.7
1,541,119	-				-0.1
1,541,158	-				-0.2
1,541,267	+				-0.2
1,541,288	-				-0.2
1,541,356	+				-0.3
1,541,455	-		Atu4405	0.38	-0.1
1,541,456	+		Atu4405	0.39	+0.1
1,541,464	-		Atu4405	0.43	+0.9
1,541,801	+		Atu4406	0.45	-0.0
1,541,873	+		Atu4406	0.59	-0.3
1,542,173	-		Atu4407	0.36	+0.0