Strain Fitness in Agrobacterium fabrum C58 around Atu2517

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,484,663	+				+1.0
2,484,663	+				-0.5
2,484,870	+		Atu2516	0.26	-0.2
2,484,889	+		Atu2516	0.29	-0.8
2,484,892	-		Atu2516	0.29	+0.2
2,484,907	+		Atu2516	0.31	+1.4
2,484,972	-		Atu2516	0.38	-0.2
2,485,008	-		Atu2516	0.42	-0.4
2,485,038	-		Atu2516	0.45	+0.3
2,485,042	+		Atu2516	0.46	+1.4
2,485,183	+		Atu2516	0.61	-1.2
2,485,260	+		Atu2516	0.70	+0.7
2,485,425	+		Atu2516	0.88	+0.0
2,485,437	+		Atu2516	0.89	+0.6
2,485,484	-				-0.0
2,485,577	+				-1.4
2,485,585	-				+0.1
2,485,610	+				+1.1
2,485,610	-				-0.6
2,485,623	-				-0.3
2,485,711	-		Atu2517	0.18	-0.5
2,485,726	+		Atu2517	0.19	+0.1
2,485,729	-		Atu2517	0.20	-0.8
2,485,734	-		Atu2517	0.20	-0.1
2,485,752	-		Atu2517	0.22	-0.1
2,485,765	+		Atu2517	0.23	-0.6
2,485,848	-		Atu2517	0.31	-0.4
2,485,864	-		Atu2517	0.33	-0.0
2,485,925	+		Atu2517	0.39	-1.9
2,485,933	-		Atu2517	0.40	-0.2
2,486,073	-		Atu2517	0.53	-0.4
2,486,088	-		Atu2517	0.55	+0.6
2,486,103	+		Atu2517	0.56	+0.0
2,486,115	-		Atu2517	0.57	-0.2
2,486,173	-		Atu2517	0.63	-0.4
2,486,173	-		Atu2517	0.63	-0.4
2,486,176	+		Atu2517	0.63	-0.4
2,486,179	+		Atu2517	0.64	+0.2
2,486,214	+		Atu2517	0.67	-1.5
2,486,314	+		Atu2517	0.77	-0.2
2,486,322	-		Atu2517	0.78	+0.3
2,486,358	-		Atu2517	0.81	-0.5
2,486,443	+		Atu2517	0.90	-2.4
2,486,443	+		Atu2517	0.90	-0.0
2,486,451	-				+0.9
2,486,500	+				+0.7
2,486,505	+				-0.4
2,486,545	-				-0.0
2,486,596	+				+0.1
2,486,613	+				-0.5
2,486,684	+				-0.4
2,486,739	+		Atu2518	0.12	-0.3
2,486,852	-		Atu2518	0.19	+0.1
2,486,913	+		Atu2518	0.23	-0.7
2,486,956	+		Atu2518	0.26	+1.0
2,487,001	+		Atu2518	0.29	+0.6
2,487,006	+		Atu2518	0.29	+0.0
2,487,006	+		Atu2518	0.29	-0.4
2,487,009	-		Atu2518	0.29	-0.1
2,487,014	-		Atu2518	0.29	-0.4
2,487,014	-		Atu2518	0.29	-0.3
2,487,014	-		Atu2518	0.29	+0.1
2,487,103	+		Atu2518	0.35	-0.0
2,487,211	-		Atu2518	0.42	-0.4
2,487,225	+		Atu2518	0.43	-0.0
2,487,333	+		Atu2518	0.49	-0.3
2,487,333	-		Atu2518	0.49	-0.4
2,487,341	-		Atu2518	0.50	-0.0
2,487,341	-		Atu2518	0.50	-0.2
2,487,380	-		Atu2518	0.52	-0.1
2,487,422	+		Atu2518	0.55	-0.4
2,487,436	+		Atu2518	0.56	-0.1
2,487,451	+		Atu2518	0.57	+1.3
2,487,496	+		Atu2518	0.60	-0.1
2,487,504	-		Atu2518	0.60	-1.1