Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0266 and Atu0267 overlap by 4 nucleotides Atu0267 and Atu0268 are separated by 11 nucleotides Atu0268 and Atu0269 are separated by 189 nucleotides
Atu0266: Atu0266 - oxidoreductase, at 263,264 to 264,247
Atu0266
Atu0267: Atu0267 - hypothetical protein, at 264,244 to 264,597
Atu0267
Atu0268: Atu0268 - hypothetical protein, at 264,609 to 264,851
Atu0268
Atu0269: Atu0269 - exodeoxyribonuclease VII large subunit, at 265,041 to 266,639
Atu0269
Position (kb) 264
265 Strain fitness (log2 ratio) -2
-1
0
1
2 at 263.373 kb on + strand, within Atu0266 at 263.411 kb on + strand, within Atu0266 at 263.445 kb on + strand, within Atu0266 at 263.453 kb on - strand, within Atu0266 at 263.453 kb on - strand, within Atu0266 at 263.453 kb on - strand, within Atu0266 at 263.469 kb on + strand, within Atu0266 at 263.562 kb on + strand, within Atu0266 at 263.607 kb on + strand, within Atu0266 at 263.686 kb on + strand, within Atu0266 at 263.700 kb on + strand, within Atu0266 at 263.702 kb on + strand, within Atu0266 at 263.713 kb on - strand, within Atu0266 at 263.780 kb on - strand, within Atu0266 at 263.808 kb on + strand, within Atu0266 at 263.836 kb on + strand, within Atu0266 at 263.841 kb on + strand, within Atu0266 at 263.859 kb on - strand, within Atu0266 at 263.859 kb on - strand, within Atu0266 at 263.993 kb on - strand, within Atu0266 at 264.062 kb on + strand, within Atu0266 at 264.114 kb on - strand, within Atu0266 at 264.125 kb on + strand, within Atu0266 at 264.133 kb on - strand, within Atu0266 at 264.133 kb on - strand, within Atu0266 at 264.151 kb on + strand at 264.321 kb on + strand, within Atu0267 at 264.377 kb on - strand, within Atu0267 at 264.411 kb on + strand, within Atu0267 at 264.434 kb on - strand, within Atu0267 at 264.443 kb on + strand, within Atu0267 at 264.591 kb on + strand at 264.606 kb on + strand at 264.614 kb on - strand at 264.777 kb on + strand, within Atu0268 at 264.777 kb on + strand, within Atu0268 at 264.789 kb on + strand, within Atu0268 at 264.789 kb on + strand, within Atu0268 at 264.794 kb on + strand, within Atu0268 at 264.795 kb on - strand, within Atu0268 at 264.795 kb on - strand, within Atu0268 at 264.814 kb on - strand, within Atu0268 at 264.815 kb on + strand, within Atu0268 at 264.822 kb on + strand, within Atu0268 at 264.886 kb on - strand at 264.950 kb on + strand at 265.045 kb on + strand at 265.073 kb on - strand at 265.289 kb on + strand, within Atu0269 at 265.363 kb on + strand, within Atu0269 at 265.476 kb on - strand, within Atu0269
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 263,373 + Atu0266 0.11 -0.3 263,411 + Atu0266 0.15 +0.3 263,445 + Atu0266 0.18 -0.4 263,453 - Atu0266 0.19 +1.3 263,453 - Atu0266 0.19 +2.6 263,453 - Atu0266 0.19 -0.2 263,469 + Atu0266 0.21 +0.2 263,562 + Atu0266 0.30 -0.3 263,607 + Atu0266 0.35 +0.1 263,686 + Atu0266 0.43 +0.1 263,700 + Atu0266 0.44 +1.4 263,702 + Atu0266 0.45 -0.4 263,713 - Atu0266 0.46 -0.3 263,780 - Atu0266 0.52 -0.3 263,808 + Atu0266 0.55 +0.1 263,836 + Atu0266 0.58 -1.1 263,841 + Atu0266 0.59 +0.9 263,859 - Atu0266 0.60 +0.9 263,859 - Atu0266 0.60 -0.3 263,993 - Atu0266 0.74 +0.2 264,062 + Atu0266 0.81 +0.3 264,114 - Atu0266 0.86 +0.2 264,125 + Atu0266 0.88 -0.2 264,133 - Atu0266 0.88 +0.8 264,133 - Atu0266 0.88 +1.1 264,151 + -0.5 264,321 + Atu0267 0.22 -0.4 264,377 - Atu0267 0.38 -0.7 264,411 + Atu0267 0.47 -0.2 264,434 - Atu0267 0.54 -0.6 264,443 + Atu0267 0.56 -1.0 264,591 + -0.4 264,606 + -2.1 264,614 - +0.6 264,777 + Atu0268 0.69 -0.5 264,777 + Atu0268 0.69 +0.0 264,789 + Atu0268 0.74 -0.0 264,789 + Atu0268 0.74 +0.0 264,794 + Atu0268 0.76 +0.3 264,795 - Atu0268 0.77 +0.2 264,795 - Atu0268 0.77 +1.8 264,814 - Atu0268 0.84 -1.6 264,815 + Atu0268 0.85 -0.3 264,822 + Atu0268 0.88 -0.3 264,886 - +1.6 264,950 + -0.4 265,045 + +0.5 265,073 - +1.6 265,289 + Atu0269 0.16 -0.6 265,363 + Atu0269 0.20 +0.9 265,476 - Atu0269 0.27 +0.0
Or see this region's nucleotide sequence