Strain Fitness in Agrobacterium fabrum C58 around Atu4124

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,241,993	+		Atu4123	0.23	-0.1
1,242,112	-		Atu4123	0.33	-1.1
1,242,134	-		Atu4123	0.34	-0.1
1,242,344	-		Atu4123	0.52	+0.1
1,242,366	+		Atu4123	0.54	-0.3
1,242,366	+		Atu4123	0.54	+0.0
1,242,374	-		Atu4123	0.54	+0.0
1,242,374	-		Atu4123	0.54	+0.2
1,242,396	-		Atu4123	0.56	-0.1
1,242,482	+		Atu4123	0.63	+0.0
1,242,523	+		Atu4123	0.67	+0.2
1,242,606	+		Atu4123	0.73	-0.9
1,242,614	-		Atu4123	0.74	-0.4
1,242,660	-		Atu4123	0.78	-0.1
1,242,665	-		Atu4123	0.78	+0.2
1,242,792	+		Atu4123	0.89	+0.5
1,242,834	+				-0.3
1,242,842	-				-0.4
1,242,985	+				-1.0
1,243,014	-				-0.3
1,243,042	+		Atu4124	0.11	-0.2
1,243,050	-		Atu4124	0.12	-0.3
1,243,218	-		Atu4124	0.32	+2.2
1,243,223	-		Atu4124	0.33	-0.3
1,243,327	-		Atu4124	0.46	-0.5
1,243,338	-		Atu4124	0.47	-1.3
1,243,354	-		Atu4124	0.49	-1.3
1,243,464	-		Atu4124	0.63	+1.6
1,243,506	+		Atu4124	0.68	-0.7
1,243,547	+		Atu4124	0.73	-0.4
1,243,600	-		Atu4124	0.80	-0.7
1,243,600	-		Atu4124	0.80	-0.8
1,243,607	+		Atu4124	0.81	-2.1
1,243,615	-		Atu4124	0.82	-0.0
1,243,633	+		Atu4124	0.84	-0.7
1,243,721	-				-0.7
1,243,744	-				-0.1
1,243,807	+				-0.8
1,243,826	-				+0.2
1,243,826	-				-0.4
1,243,886	+		Atu4125	0.17	-0.2
1,243,887	+		Atu4125	0.18	-0.0
1,243,904	+		Atu4125	0.20	+0.9
1,244,022	-		Atu4125	0.37	+0.4
1,244,128	+		Atu4125	0.52	-0.3
1,244,138	+		Atu4125	0.53	-0.7
1,244,146	-		Atu4125	0.54	+0.7
1,244,303	-		Atu4125	0.77	-0.4
1,244,329	-		Atu4125	0.80	-0.7
1,244,500	-				-0.7
1,244,511	-				+0.1
1,244,535	-				+0.4
1,244,688	+		Atu4126	0.25	+0.3
1,244,688	+		Atu4126	0.25	-0.1
1,244,696	-		Atu4126	0.26	-0.6
1,244,733	+		Atu4126	0.30	-0.6