Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fepB and entC are separated by 374 nucleotides entC and entE are separated by 9 nucleotides
b0592: fepB - iron-enterobactin transporter subunit (NCBI), at 622,777 to 623,733
fepB
b0593: entC - isochorismate synthase (NCBI), at 624,108 to 625,283
entC
b0594: entE - 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex (NCBI), at 625,293 to 626,903
entE
Position (kb)
624
625
626 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 623.119 kb on + strand, within fepB at 623.140 kb on - strand, within fepB at 623.148 kb on - strand, within fepB at 623.148 kb on - strand, within fepB at 623.199 kb on - strand, within fepB at 623.253 kb on - strand, within fepB at 623.341 kb on - strand, within fepB at 623.405 kb on - strand, within fepB at 623.405 kb on - strand, within fepB at 623.426 kb on + strand, within fepB at 623.426 kb on + strand, within fepB at 623.458 kb on - strand, within fepB at 623.458 kb on - strand, within fepB at 623.467 kb on - strand, within fepB at 623.467 kb on - strand, within fepB at 623.470 kb on - strand, within fepB at 623.470 kb on - strand, within fepB at 623.563 kb on + strand, within fepB at 623.576 kb on - strand, within fepB at 623.576 kb on - strand, within fepB at 623.591 kb on - strand, within fepB at 623.591 kb on - strand, within fepB at 623.610 kb on + strand, within fepB at 623.672 kb on + strand at 623.708 kb on + strand at 623.806 kb on + strand at 623.822 kb on + strand at 623.822 kb on + strand at 623.830 kb on - strand at 623.832 kb on - strand at 623.841 kb on + strand at 623.857 kb on + strand at 623.865 kb on + strand at 623.869 kb on + strand at 623.869 kb on + strand at 623.879 kb on - strand at 623.907 kb on - strand at 623.907 kb on - strand at 624.008 kb on + strand at 624.130 kb on - strand at 624.130 kb on - strand at 624.138 kb on - strand at 624.138 kb on - strand at 624.259 kb on + strand, within entC at 624.428 kb on - strand, within entC at 624.428 kb on - strand, within entC at 624.490 kb on + strand, within entC at 624.547 kb on - strand, within entC at 624.580 kb on - strand, within entC at 624.691 kb on + strand, within entC at 624.691 kb on + strand, within entC at 624.699 kb on - strand, within entC at 624.699 kb on - strand, within entC at 624.699 kb on - strand, within entC at 624.831 kb on - strand, within entC at 624.875 kb on + strand, within entC at 624.947 kb on + strand, within entC at 624.947 kb on + strand, within entC at 624.984 kb on + strand, within entC at 624.984 kb on + strand, within entC at 625.127 kb on - strand, within entC at 625.365 kb on - strand at 625.365 kb on - strand at 625.401 kb on + strand at 625.401 kb on + strand at 625.433 kb on + strand at 625.593 kb on + strand, within entE at 625.604 kb on + strand, within entE at 625.604 kb on + strand, within entE at 625.617 kb on - strand, within entE at 625.688 kb on + strand, within entE at 625.744 kb on + strand, within entE at 625.744 kb on + strand, within entE at 625.746 kb on + strand, within entE at 625.900 kb on + strand, within entE at 625.958 kb on + strand, within entE at 625.964 kb on - strand, within entE at 625.964 kb on - strand, within entE at 625.971 kb on - strand, within entE at 626.073 kb on + strand, within entE
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 623,119 + fepB b0592 0.36 +0.1 623,140 - fepB b0592 0.38 -1.3 623,148 - fepB b0592 0.39 -1.3 623,148 - fepB b0592 0.39 +1.1 623,199 - fepB b0592 0.44 -0.0 623,253 - fepB b0592 0.50 -1.6 623,341 - fepB b0592 0.59 +0.1 623,405 - fepB b0592 0.66 +1.5 623,405 - fepB b0592 0.66 +0.7 623,426 + fepB b0592 0.68 +0.8 623,426 + fepB b0592 0.68 +0.2 623,458 - fepB b0592 0.71 -0.4 623,458 - fepB b0592 0.71 -0.9 623,467 - fepB b0592 0.72 -0.6 623,467 - fepB b0592 0.72 +0.3 623,470 - fepB b0592 0.72 +0.2 623,470 - fepB b0592 0.72 +0.1 623,563 + fepB b0592 0.82 -0.5 623,576 - fepB b0592 0.83 -1.6 623,576 - fepB b0592 0.83 +0.0 623,591 - fepB b0592 0.85 +0.0 623,591 - fepB b0592 0.85 -0.1 623,610 + fepB b0592 0.87 -2.4 623,672 + +1.5 623,708 + -0.4 623,806 + +1.6 623,822 + +2.1 623,822 + +0.8 623,830 - +0.0 623,832 - -0.1 623,841 + +2.3 623,857 + +1.4 623,865 + +1.3 623,869 + +1.7 623,869 + -0.6 623,879 - -1.0 623,907 - +0.8 623,907 - +0.3 624,008 + +1.4 624,130 - +1.6 624,130 - +1.8 624,138 - +2.0 624,138 - +2.2 624,259 + entC b0593 0.13 -0.0 624,428 - entC b0593 0.27 -0.1 624,428 - entC b0593 0.27 -1.0 624,490 + entC b0593 0.32 +1.1 624,547 - entC b0593 0.37 +1.1 624,580 - entC b0593 0.40 +0.3 624,691 + entC b0593 0.50 +0.6 624,691 + entC b0593 0.50 -1.0 624,699 - entC b0593 0.50 +0.9 624,699 - entC b0593 0.50 +1.6 624,699 - entC b0593 0.50 +1.3 624,831 - entC b0593 0.61 +1.3 624,875 + entC b0593 0.65 -0.9 624,947 + entC b0593 0.71 -0.2 624,947 + entC b0593 0.71 -0.3 624,984 + entC b0593 0.74 +0.4 624,984 + entC b0593 0.74 +0.2 625,127 - entC b0593 0.87 +0.0 625,365 - -1.2 625,365 - -0.5 625,401 + -0.2 625,401 + +0.5 625,433 + -0.6 625,593 + entE b0594 0.19 +0.5 625,604 + entE b0594 0.19 -0.6 625,604 + entE b0594 0.19 +0.5 625,617 - entE b0594 0.20 -0.3 625,688 + entE b0594 0.25 -0.4 625,744 + entE b0594 0.28 -0.6 625,744 + entE b0594 0.28 -0.9 625,746 + entE b0594 0.28 +0.6 625,900 + entE b0594 0.38 +1.4 625,958 + entE b0594 0.41 +2.1 625,964 - entE b0594 0.42 -0.8 625,964 - entE b0594 0.42 -1.8 625,971 - entE b0594 0.42 +0.1 626,073 + entE b0594 0.48 +0.1
Or see this region's nucleotide sequence