Strain Fitness in Escherichia coli BW25113 around b3642

Experiment: LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)
3,812,407	+				+1.7
3,812,413	-				+2.1
3,812,413	-				-0.4
3,812,424	+				+0.6
3,812,567	+				-0.9
3,812,567	+				-0.1
3,812,604	-	ttk	b3641	0.15	+0.2
3,812,662	+	ttk	b3641	0.24	-0.2
3,812,662	+	ttk	b3641	0.24	+0.2
3,812,700	-	ttk	b3641	0.31	-0.5
3,812,700	-	ttk	b3641	0.31	+0.4
3,812,759	+	ttk	b3641	0.41	-0.7
3,812,759	+	ttk	b3641	0.41	-0.8
3,812,816	+	ttk	b3641	0.50	-0.7
3,812,821	+	ttk	b3641	0.51	-0.1
3,812,824	-	ttk	b3641	0.51	+1.5
3,812,860	+				+0.1
3,812,873	-	ttk	b3641	0.60	-0.3
3,812,883	-	ttk	b3641	0.61	-0.1
3,812,883	-	ttk	b3641	0.61	+1.2
3,812,957	+	ttk	b3641	0.74	-0.2
3,812,963	+	ttk	b3641	0.75	-0.7
3,812,963	+	ttk	b3641	0.75	-2.8
3,812,971	-	ttk	b3641	0.76	+0.3
3,812,984	-	ttk	b3641	0.78	-0.6
3,812,984	-	ttk	b3641	0.78	+1.1
3,813,018	+	ttk	b3641	0.84	+0.3
3,813,018	+	ttk	b3641	0.84	-0.8
3,813,018	+	ttk	b3641	0.84	-2.1
3,813,054	-				-1.6
3,813,168	+				-1.1
3,813,172	-				-0.5
3,813,175	+				-1.3
3,813,183	-				-2.5
3,813,183	-				-3.2
3,813,183	-				-3.2
3,813,236	+	pyrE	b3642	0.13	-3.8
3,813,305	+	pyrE	b3642	0.24	-2.1
3,813,320	+	pyrE	b3642	0.26	-3.7
3,813,328	-	pyrE	b3642	0.28	-2.7
3,813,529	+	pyrE	b3642	0.59	-2.1
3,813,573	+	pyrE	b3642	0.66	-3.1
3,813,573	+	pyrE	b3642	0.66	-1.1
3,813,581	-	pyrE	b3642	0.67	-3.6
3,813,650	+	pyrE	b3642	0.78	-0.9
3,813,656	+	pyrE	b3642	0.79	-4.1
3,813,667	+	pyrE	b3642	0.81	-1.8
3,813,667	+	pyrE	b3642	0.81	-3.9
3,813,685	-	pyrE	b3642	0.83	-3.2
3,813,743	-				-1.9
3,813,755	+				-2.7
3,813,764	+				-3.3
3,813,764	+				-3.5
3,813,769	+				-3.0
3,813,787	-				-2.0
3,813,793	-				+2.1
3,813,793	-				+0.4
3,813,834	+				+2.3
3,813,834	+				+2.0
3,813,845	-				+2.1
3,813,910	+				-0.4
3,813,910	+				+0.3
3,813,910	+				+2.1
3,813,910	+				+0.5
3,813,923	+				-0.5
3,813,923	+				-0.1
3,813,923	-				+2.2
3,813,923	-				+2.5
3,813,936	+				-2.6
3,813,936	+				-1.0
3,814,019	+	rph	b3643	0.19	-2.2
3,814,041	-	rph	b3643	0.23	+2.5
3,814,041	-	rph	b3643	0.23	+2.1
3,814,094	-	rph	b3643	0.30	+2.0
3,814,196	-	rph	b3643	0.45	+2.4
3,814,199	-	rph	b3643	0.46	+1.8
3,814,201	-	rph	b3643	0.46	+2.1
3,814,201	-	rph	b3643	0.46	+2.7
3,814,204	+	rph	b3643	0.46	-1.3
3,814,204	+	rph	b3643	0.46	-2.3
3,814,221	+	rph	b3643	0.49	-1.6
3,814,248	+	rph	b3643	0.53	-2.3
3,814,248	+	rph	b3643	0.53	-2.0
3,814,256	-	rph	b3643	0.54	+2.1
3,814,316	+	rph	b3643	0.63	-3.6
3,814,322	+	rph	b3643	0.63	-2.8
3,814,349	-	rph	b3643	0.67	+2.2
3,814,349	-	rph	b3643	0.67	+1.8
3,814,360	-	rph	b3643	0.69	+1.3
3,814,370	-	rph	b3643	0.70	+2.6
3,814,379	+	rph	b3643	0.72	-4.5
3,814,379	+	rph	b3643	0.72	-2.1
3,814,416	-	rph	b3643	0.77	+1.8
3,814,448	-	rph	b3643	0.82	+2.4
3,814,451	-	rph	b3643	0.82	+1.7
3,814,451	-	rph	b3643	0.82	+1.8
3,814,454	+	rph	b3643	0.83	-2.2
3,814,462	-	rph	b3643	0.84	+1.6
3,814,462	-	rph	b3643	0.84	+2.2
3,814,483	+	rph	b3643	0.87	-3.4
3,814,488	+	rph	b3643	0.88	-2.7
3,814,488	+	rph	b3643	0.88	-3.3
3,814,488	+	rph	b3643	0.88	-3.8
3,814,535	-				+1.7
3,814,535	-				+1.9
3,814,535	-				+1.9
3,814,535	-				+1.6
3,814,565	-				+1.9
3,814,591	+				-2.1
3,814,591	+				-3.1
3,814,617	+				-2.4
3,814,639	+				+0.5
3,814,702	-				+4.2
3,814,717	+				+2.5
3,814,717	-				+3.3
3,814,717	-				+4.5
3,814,717	-				+3.3
3,814,717	-				+3.5
3,814,717	-				+3.4
3,814,725	-				+3.6
3,814,725	-				+2.4
3,814,783	-				+3.9