Strain Fitness in Escherichia coli BW25113 around b2148

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyeiA and mglC are separated by 242 nucleotidesmglC and mglA are separated by 15 nucleotides b2147: yeiA - putative oxidoreductase (VIMSS), at 2,233,287 to 2,234,522 yeiA b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775 mglC b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311 mglA Position (kb) 2234 2235 2236Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2233.800 kb on - strand, within yeiAat 2233.904 kb on + strand, within yeiAat 2233.963 kb on + strand, within yeiAat 2234.029 kb on + strand, within yeiAat 2234.029 kb on + strand, within yeiAat 2234.029 kb on + strand, within yeiAat 2234.037 kb on - strand, within yeiAat 2234.078 kb on - strand, within yeiAat 2234.078 kb on - strand, within yeiAat 2234.127 kb on - strand, within yeiAat 2234.145 kb on + strand, within yeiAat 2234.145 kb on + strand, within yeiAat 2234.151 kb on + strand, within yeiAat 2234.151 kb on + strand, within yeiAat 2234.155 kb on - strand, within yeiAat 2234.155 kb on - strand, within yeiAat 2234.156 kb on - strand, within yeiAat 2234.156 kb on - strand, within yeiAat 2234.228 kb on - strand, within yeiAat 2234.235 kb on - strand, within yeiAat 2234.268 kb on + strand, within yeiAat 2234.289 kb on + strand, within yeiAat 2234.289 kb on - strand, within yeiAat 2234.335 kb on + strand, within yeiAat 2234.341 kb on - strand, within yeiAat 2234.356 kb on + strand, within yeiAat 2234.387 kb on + strand, within yeiAat 2234.402 kb on + strandat 2234.461 kb on + strandat 2234.561 kb on - strandat 2234.644 kb on + strandat 2234.789 kb on - strandat 2234.823 kb on + strandat 2234.843 kb on + strandat 2234.859 kb on + strandat 2234.923 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.956 kb on - strand, within mglCat 2234.963 kb on - strand, within mglCat 2234.963 kb on - strand, within mglCat 2234.988 kb on - strand, within mglCat 2235.007 kb on + strand, within mglCat 2235.021 kb on - strand, within mglCat 2235.075 kb on + strand, within mglCat 2235.103 kb on - strand, within mglCat 2235.103 kb on - strand, within mglCat 2235.107 kb on + strand, within mglCat 2235.107 kb on + strand, within mglCat 2235.113 kb on - strand, within mglCat 2235.113 kb on - strand, within mglCat 2235.209 kb on + strand, within mglCat 2235.259 kb on + strand, within mglCat 2235.366 kb on + strand, within mglCat 2235.366 kb on + strand, within mglCat 2235.473 kb on + strand, within mglCat 2235.473 kb on + strand, within mglCat 2235.522 kb on + strand, within mglCat 2235.523 kb on - strand, within mglCat 2235.557 kb on - strand, within mglCat 2235.564 kb on + strand, within mglCat 2235.580 kb on + strand, within mglCat 2235.640 kb on + strand, within mglCat 2235.640 kb on + strand, within mglCat 2235.795 kb on - strandat 2235.805 kb on - strandat 2235.805 kb on - strandat 2235.902 kb on - strandat 2235.934 kb on - strandat 2235.998 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.007 kb on - strand, within mglAat 2236.010 kb on - strand, within mglAat 2236.067 kb on - strand, within mglAat 2236.067 kb on - strand, within mglAat 2236.147 kb on + strand, within mglAat 2236.173 kb on + strand, within mglAat 2236.249 kb on - strand, within mglAat 2236.249 kb on - strand, within mglAat 2236.284 kb on - strand, within mglAat 2236.331 kb on + strand, within mglAat 2236.331 kb on + strand, within mglAat 2236.331 kb on - strand, within mglAat 2236.356 kb on - strand, within mglAat 2236.364 kb on - strand, within mglAat 2236.387 kb on - strand, within mglAat 2236.421 kb on - strand, within mglAat 2236.446 kb on + strand, within mglAat 2236.466 kb on - strand, within mglAat 2236.478 kb on - strand, within mglAat 2236.510 kb on - strand, within mglAat 2236.510 kb on - strand, within mglAat 2236.559 kb on + strand, within mglAat 2236.579 kb on - strand, within mglAat 2236.579 kb on - strand, within mglAat 2236.626 kb on - strand, within mglAat 2236.697 kb on + strand, within mglAat 2236.697 kb on + strand, within mglAat 2236.774 kb on + strand, within mglA

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,233,800 - yeiA b2147 0.42 -0.9
2,233,904 + yeiA b2147 0.50 -0.7
2,233,963 + yeiA b2147 0.55 -1.1
2,234,029 + yeiA b2147 0.60 -2.2
2,234,029 + yeiA b2147 0.60 -0.1
2,234,029 + yeiA b2147 0.60 +0.6
2,234,037 - yeiA b2147 0.61 -0.0
2,234,078 - yeiA b2147 0.64 +0.4
2,234,078 - yeiA b2147 0.64 +1.6
2,234,127 - yeiA b2147 0.68 -0.4
2,234,145 + yeiA b2147 0.69 -1.1
2,234,145 + yeiA b2147 0.69 -0.9
2,234,151 + yeiA b2147 0.70 -0.1
2,234,151 + yeiA b2147 0.70 -0.3
2,234,155 - yeiA b2147 0.70 -0.8
2,234,155 - yeiA b2147 0.70 +1.0
2,234,156 - yeiA b2147 0.70 -0.6
2,234,156 - yeiA b2147 0.70 +1.1
2,234,228 - yeiA b2147 0.76 -0.7
2,234,235 - yeiA b2147 0.77 -0.1
2,234,268 + yeiA b2147 0.79 +0.1
2,234,289 + yeiA b2147 0.81 -1.4
2,234,289 - yeiA b2147 0.81 +0.1
2,234,335 + yeiA b2147 0.85 -0.1
2,234,341 - yeiA b2147 0.85 -1.3
2,234,356 + yeiA b2147 0.86 -0.8
2,234,387 + yeiA b2147 0.89 -0.0
2,234,402 + -1.6
2,234,461 + +0.1
2,234,561 - -1.5
2,234,644 + +1.0
2,234,789 - -0.3
2,234,823 + -0.2
2,234,843 + +1.4
2,234,859 + +0.3
2,234,923 + mglC b2148 0.16 -0.2
2,234,944 + mglC b2148 0.18 +0.6
2,234,944 + mglC b2148 0.18 -0.3
2,234,944 + mglC b2148 0.18 -1.9
2,234,944 + mglC b2148 0.18 -0.6
2,234,956 - mglC b2148 0.19 -0.6
2,234,963 - mglC b2148 0.20 -1.1
2,234,963 - mglC b2148 0.20 -0.1
2,234,988 - mglC b2148 0.22 -0.1
2,235,007 + mglC b2148 0.24 -1.5
2,235,021 - mglC b2148 0.25 +0.4
2,235,075 + mglC b2148 0.31 +0.3
2,235,103 - mglC b2148 0.33 +0.8
2,235,103 - mglC b2148 0.33 -0.0
2,235,107 + mglC b2148 0.34 -0.7
2,235,107 + mglC b2148 0.34 -1.0
2,235,113 - mglC b2148 0.34 +0.7
2,235,113 - mglC b2148 0.34 +0.0
2,235,209 + mglC b2148 0.44 -0.1
2,235,259 + mglC b2148 0.49 +0.2
2,235,366 + mglC b2148 0.59 -0.3
2,235,366 + mglC b2148 0.59 -0.2
2,235,473 + mglC b2148 0.70 +0.1
2,235,473 + mglC b2148 0.70 +1.1
2,235,522 + mglC b2148 0.75 -0.8
2,235,523 - mglC b2148 0.75 +0.0
2,235,557 - mglC b2148 0.78 -0.5
2,235,564 + mglC b2148 0.79 +1.0
2,235,580 + mglC b2148 0.81 +0.0
2,235,640 + mglC b2148 0.87 +0.6
2,235,640 + mglC b2148 0.87 +3.3
2,235,795 - -0.2
2,235,805 - +0.7
2,235,805 - +1.1
2,235,902 - +0.0
2,235,934 - +0.4
2,235,998 - mglA b2149 0.14 -0.7
2,236,005 - mglA b2149 0.14 -0.0
2,236,005 - mglA b2149 0.14 +0.3
2,236,005 - mglA b2149 0.14 +0.7
2,236,005 - mglA b2149 0.14 +0.9
2,236,005 - mglA b2149 0.14 +0.3
2,236,005 - mglA b2149 0.14 -0.8
2,236,007 - mglA b2149 0.14 -1.1
2,236,010 - mglA b2149 0.14 +1.3
2,236,067 - mglA b2149 0.18 +0.4
2,236,067 - mglA b2149 0.18 +1.4
2,236,147 + mglA b2149 0.23 +0.1
2,236,173 + mglA b2149 0.25 +0.7
2,236,249 - mglA b2149 0.30 +1.1
2,236,249 - mglA b2149 0.30 +0.3
2,236,284 - mglA b2149 0.32 -0.7
2,236,331 + mglA b2149 0.36 +2.3
2,236,331 + mglA b2149 0.36 +1.3
2,236,331 - mglA b2149 0.36 -0.1
2,236,356 - mglA b2149 0.37 -0.1
2,236,364 - mglA b2149 0.38 -0.7
2,236,387 - mglA b2149 0.39 +0.4
2,236,421 - mglA b2149 0.41 -0.6
2,236,446 + mglA b2149 0.43 +3.3
2,236,466 - mglA b2149 0.44 -0.8
2,236,478 - mglA b2149 0.45 -0.3
2,236,510 - mglA b2149 0.47 +2.4
2,236,510 - mglA b2149 0.47 -0.1
2,236,559 + mglA b2149 0.50 +1.2
2,236,579 - mglA b2149 0.52 -0.3
2,236,579 - mglA b2149 0.52 +0.6
2,236,626 - mglA b2149 0.55 +0.6
2,236,697 + mglA b2149 0.60 +2.8
2,236,697 + mglA b2149 0.60 +0.4
2,236,774 + mglA b2149 0.65 +1.3

Or see this region's nucleotide sequence