Strain Fitness in Escherichia coli BW25113 around b0900
Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Guanosine 0.35306 mM (C) |
---|---|---|---|---|---|
remove | |||||
946,887 | + | b0899 | b0899 | 0.30 | -0.2 |
946,887 | + | b0899 | b0899 | 0.30 | +0.3 |
946,897 | + | b0899 | b0899 | 0.31 | +0.5 |
946,905 | - | b0899 | b0899 | 0.32 | -0.5 |
946,905 | - | b0899 | b0899 | 0.32 | +1.1 |
946,924 | + | b0899 | b0899 | 0.33 | -0.5 |
946,939 | + | b0899 | b0899 | 0.34 | -0.1 |
946,941 | - | b0899 | b0899 | 0.34 | +3.5 |
946,956 | + | b0899 | b0899 | 0.35 | +0.4 |
946,956 | + | b0899 | b0899 | 0.35 | +0.8 |
946,956 | + | b0899 | b0899 | 0.35 | +0.3 |
946,956 | + | b0899 | b0899 | 0.35 | +2.0 |
946,956 | + | b0899 | b0899 | 0.35 | +3.5 |
946,956 | + | b0899 | b0899 | 0.35 | +0.1 |
946,956 | + | b0899 | b0899 | 0.35 | -0.5 |
946,966 | - | b0899 | b0899 | 0.36 | +1.9 |
946,966 | - | b0899 | b0899 | 0.36 | +1.1 |
947,000 | + | b0899 | b0899 | 0.38 | +1.1 |
947,054 | - | b0899 | b0899 | 0.42 | +0.5 |
947,064 | - | b0899 | b0899 | 0.43 | +1.5 |
947,068 | + | b0899 | b0899 | 0.43 | -0.5 |
947,109 | - | b0899 | b0899 | 0.46 | +2.5 |
947,109 | - | b0899 | b0899 | 0.46 | +3.5 |
947,117 | + | b0899 | b0899 | 0.46 | +0.6 |
947,168 | + | b0899 | b0899 | 0.50 | +0.3 |
947,168 | + | b0899 | b0899 | 0.50 | +0.4 |
947,184 | - | b0899 | b0899 | 0.51 | +3.2 |
947,187 | + | b0899 | b0899 | 0.51 | -0.1 |
947,197 | + | b0899 | b0899 | 0.52 | +0.3 |
947,202 | + | b0899 | b0899 | 0.52 | +0.0 |
947,202 | + | b0899 | b0899 | 0.52 | -2.8 |
947,202 | + | b0899 | b0899 | 0.52 | +0.4 |
947,202 | + | b0899 | b0899 | 0.52 | +0.9 |
947,205 | - | b0899 | b0899 | 0.53 | +1.1 |
947,212 | + | b0899 | b0899 | 0.53 | -1.8 |
947,212 | + | b0899 | b0899 | 0.53 | -0.9 |
947,220 | - | b0899 | b0899 | 0.54 | +3.5 |
947,224 | + | b0899 | b0899 | 0.54 | -0.2 |
947,224 | + | b0899 | b0899 | 0.54 | +0.2 |
947,240 | + | b0899 | b0899 | 0.55 | -0.7 |
947,276 | + | b0899 | b0899 | 0.58 | -0.1 |
947,276 | + | b0899 | b0899 | 0.58 | +0.4 |
947,286 | + | b0899 | b0899 | 0.58 | -1.2 |
947,303 | + | b0899 | b0899 | 0.59 | -0.7 |
947,303 | + | b0899 | b0899 | 0.59 | +0.0 |
947,303 | + | b0899 | b0899 | 0.59 | -0.1 |
947,303 | + | b0899 | b0899 | 0.59 | +0.5 |
947,303 | + | b0899 | b0899 | 0.59 | -0.3 |
947,306 | + | b0899 | b0899 | 0.60 | +0.9 |
947,312 | + | b0899 | b0899 | 0.60 | -0.6 |
947,323 | + | b0899 | b0899 | 0.61 | +0.3 |
947,334 | + | b0899 | b0899 | 0.62 | -0.0 |
947,347 | + | b0899 | b0899 | 0.63 | -0.8 |
947,353 | + | b0899 | b0899 | 0.63 | +0.1 |
947,353 | + | b0899 | b0899 | 0.63 | +1.1 |
947,360 | - | b0899 | b0899 | 0.63 | +0.6 |
947,361 | - | b0899 | b0899 | 0.64 | +1.5 |
947,361 | - | b0899 | b0899 | 0.64 | +0.5 |
947,367 | - | b0899 | b0899 | 0.64 | -0.8 |
947,367 | - | b0899 | b0899 | 0.64 | +1.9 |
947,373 | - | b0899 | b0899 | 0.64 | +3.5 |
947,375 | + | b0899 | b0899 | 0.65 | -0.1 |
947,375 | + | b0899 | b0899 | 0.65 | -0.1 |
947,378 | + | b0899 | b0899 | 0.65 | +0.2 |
947,405 | + | b0899 | b0899 | 0.67 | -0.8 |
947,413 | + | b0899 | b0899 | 0.67 | -0.9 |
947,413 | + | b0899 | b0899 | 0.67 | -1.2 |
947,418 | + | b0899 | b0899 | 0.68 | +0.3 |
947,442 | + | b0899 | b0899 | 0.69 | -1.3 |
947,451 | - | b0899 | b0899 | 0.70 | -0.8 |
947,461 | + | b0899 | b0899 | 0.71 | -0.6 |
947,472 | + | b0899 | b0899 | 0.71 | -0.6 |
947,475 | - | b0899 | b0899 | 0.71 | +4.5 |
947,494 | + | b0899 | b0899 | 0.73 | +0.7 |
947,497 | + | b0899 | b0899 | 0.73 | -0.4 |
947,498 | + | b0899 | b0899 | 0.73 | -0.2 |
947,498 | + | b0899 | b0899 | 0.73 | -0.8 |
947,515 | + | b0899 | b0899 | 0.74 | -0.7 |
947,515 | + | b0899 | b0899 | 0.74 | +0.3 |
947,530 | + | b0899 | b0899 | 0.75 | +1.1 |
947,530 | + | b0899 | b0899 | 0.75 | +1.6 |
947,534 | + | b0899 | b0899 | 0.76 | -0.1 |
947,544 | + | b0899 | b0899 | 0.76 | +0.1 |
947,558 | + | b0899 | b0899 | 0.77 | -0.6 |
947,581 | + | b0899 | b0899 | 0.79 | -0.9 |
947,701 | - | b0899 | b0899 | 0.87 | -0.8 |
947,729 | - | b0899 | b0899 | 0.89 | +1.9 |
947,729 | - | b0899 | b0899 | 0.89 | -0.2 |
947,738 | - | b0899 | b0899 | 0.90 | +2.5 |
947,738 | - | b0899 | b0899 | 0.90 | +2.5 |
947,740 | + | -2.1 | |||
947,746 | - | +1.1 | |||
947,748 | - | +0.3 | |||
947,775 | + | -0.7 | |||
947,776 | + | +1.6 | |||
947,776 | + | +0.1 | |||
947,781 | - | +0.2 | |||
947,783 | + | -1.0 | |||
947,783 | - | +1.1 | |||
947,784 | - | -0.1 | |||
947,787 | + | -0.2 | |||
947,818 | + | -0.3 | |||
947,833 | + | -1.0 | |||
947,833 | + | +0.6 | |||
947,833 | + | -0.8 | |||
947,861 | - | +1.0 | |||
947,895 | + | +0.0 | |||
947,895 | + | +0.1 | |||
947,899 | + | +0.3 | |||
947,905 | - | -0.7 | |||
947,916 | - | +0.1 | |||
947,916 | - | +0.2 | |||
947,916 | - | -0.2 | |||
947,916 | - | +0.1 | |||
947,942 | - | -0.7 | |||
947,960 | - | +0.1 | |||
947,966 | - | -0.7 | |||
947,966 | - | +0.0 | |||
947,967 | - | -0.5 | |||
947,967 | - | -0.3 | |||
947,967 | - | -0.4 | |||
947,967 | - | +0.8 | |||
947,967 | - | -0.0 | |||
947,967 | - | -0.6 | |||
948,002 | + | ycaN | b0900 | 0.13 | +0.5 |
948,007 | + | ycaN | b0900 | 0.14 | +0.6 |
948,023 | - | ycaN | b0900 | 0.15 | -0.3 |
948,023 | - | ycaN | b0900 | 0.15 | -0.3 |
948,025 | - | ycaN | b0900 | 0.16 | +0.3 |
948,025 | - | ycaN | b0900 | 0.16 | -0.4 |
948,026 | - | ycaN | b0900 | 0.16 | -1.0 |
948,028 | - | ycaN | b0900 | 0.16 | +0.2 |
948,043 | + | ycaN | b0900 | 0.18 | -0.6 |
948,043 | + | ycaN | b0900 | 0.18 | -1.5 |
948,051 | - | ycaN | b0900 | 0.18 | +0.3 |
948,051 | - | ycaN | b0900 | 0.18 | -1.9 |
948,051 | - | ycaN | b0900 | 0.18 | +0.3 |
948,051 | - | ycaN | b0900 | 0.18 | -1.2 |
948,051 | - | ycaN | b0900 | 0.18 | -0.2 |
948,055 | + | ycaN | b0900 | 0.19 | +1.1 |
948,062 | - | ycaN | b0900 | 0.20 | -0.3 |
948,065 | + | ycaN | b0900 | 0.20 | -0.5 |
948,067 | + | ycaN | b0900 | 0.20 | +0.6 |
948,070 | - | ycaN | b0900 | 0.21 | -1.1 |
948,070 | - | ycaN | b0900 | 0.21 | +1.1 |
948,074 | - | ycaN | b0900 | 0.21 | -0.6 |
948,080 | - | ycaN | b0900 | 0.22 | -0.5 |
948,082 | - | ycaN | b0900 | 0.22 | +0.1 |
948,094 | - | ycaN | b0900 | 0.23 | -1.3 |
948,094 | - | ycaN | b0900 | 0.23 | -0.4 |
948,094 | - | ycaN | b0900 | 0.23 | -0.3 |
948,096 | + | ycaN | b0900 | 0.23 | +0.2 |
948,106 | + | ycaN | b0900 | 0.25 | +0.6 |
948,110 | + | ycaN | b0900 | 0.25 | -1.0 |
948,162 | - | ycaN | b0900 | 0.31 | -0.1 |
948,172 | - | ycaN | b0900 | 0.32 | -0.0 |
948,244 | - | ycaN | b0900 | 0.40 | -0.4 |
948,244 | - | ycaN | b0900 | 0.40 | -0.9 |
948,256 | + | ycaN | b0900 | 0.41 | +0.3 |
948,256 | + | ycaN | b0900 | 0.41 | -0.4 |
948,258 | + | ycaN | b0900 | 0.41 | -2.1 |
948,295 | - | ycaN | b0900 | 0.45 | +0.9 |
948,320 | - | ycaN | b0900 | 0.48 | -0.8 |
948,349 | + | ycaN | b0900 | 0.51 | +0.2 |
948,412 | - | ycaN | b0900 | 0.58 | +3.5 |
948,471 | + | ycaN | b0900 | 0.65 | +0.4 |
948,485 | + | ycaN | b0900 | 0.66 | +1.5 |
948,501 | + | ycaN | b0900 | 0.68 | -1.4 |
948,504 | - | ycaN | b0900 | 0.68 | -1.8 |
948,545 | + | ycaN | b0900 | 0.73 | -1.2 |
948,546 | + | ycaN | b0900 | 0.73 | +0.9 |
948,565 | - | ycaN | b0900 | 0.75 | +0.5 |
948,616 | + | ycaN | b0900 | 0.81 | +1.2 |
948,616 | + | ycaN | b0900 | 0.81 | -0.0 |
948,616 | + | ycaN | b0900 | 0.81 | -0.7 |
948,632 | - | ycaN | b0900 | 0.82 | +0.9 |
948,673 | + | ycaN | b0900 | 0.87 | -0.4 |
948,702 | + | +2.5 | |||
948,706 | + | +1.5 | |||
948,707 | + | +1.5 | |||
948,707 | + | +0.6 | |||
948,707 | + | +0.5 | |||
948,707 | + | +0.3 | |||
948,708 | + | +0.5 | |||
948,708 | + | +0.3 | |||
948,708 | + | +1.3 | |||
948,708 | + | +3.5 | |||
948,714 | + | +2.5 | |||
948,715 | - | -0.2 | |||
948,715 | - | +1.5 | |||
948,715 | - | +0.3 | |||
948,715 | - | +0.9 | |||
948,716 | - | -0.5 | |||
948,716 | - | +0.9 | |||
948,716 | - | +0.5 | |||
948,716 | - | +1.4 | |||
948,722 | - | +0.5 | |||
948,722 | - | +0.3 | |||
948,725 | + | +0.1 | |||
948,752 | + | +1.9 | |||
948,752 | + | +0.9 | |||
948,773 | + | -0.6 | |||
948,775 | + | -0.4 | |||
948,837 | + | -1.3 | |||
948,837 | + | -0.2 | |||
948,837 | + | -0.7 | |||
948,838 | - | +1.9 | |||
948,839 | + | -0.7 | |||
948,839 | + | -0.6 | |||
948,845 | - | +0.9 | |||
948,845 | - | -0.6 | |||
948,850 | + | -0.6 | |||
948,850 | + | -0.1 | |||
948,851 | + | +0.8 | |||
948,851 | + | -1.0 | |||
948,852 | + | -0.4 | |||
948,858 | - | +0.8 | |||
948,863 | + | +0.0 | |||
948,863 | + | +0.2 | |||
948,863 | + | +1.3 | |||
948,863 | + | -0.1 | |||
948,863 | + | -0.8 | |||
948,863 | + | +0.5 | |||
948,863 | + | -0.1 | |||
948,871 | - | +1.0 | |||
948,920 | + | -0.1 | |||
948,920 | + | -1.6 | |||
948,920 | + | -0.6 | |||
948,920 | + | -0.2 | |||
948,920 | + | -0.2 | |||
948,920 | + | +0.2 | |||
948,920 | + | -0.3 | |||
948,921 | + | +0.1 | |||
948,921 | + | -0.4 | |||
948,923 | - | +1.9 | |||
948,928 | - | +0.5 | |||
948,928 | - | +1.1 | |||
948,928 | - | +0.6 | |||
948,928 | - | +0.9 | |||
948,930 | + | -1.3 | |||
948,930 | + | -0.0 | |||
948,930 | + | +0.4 | |||
948,931 | + | -0.2 | |||
948,938 | + | +0.5 | |||
948,938 | - | +1.5 | |||
948,938 | - | -0.9 | |||
948,946 | + | -0.3 | |||
948,949 | + | +2.6 | |||
948,949 | + | -0.3 | |||
948,951 | + | ycaK | b0901 | 0.10 | -0.1 |
948,951 | + | ycaK | b0901 | 0.10 | -1.1 |
948,962 | + | ycaK | b0901 | 0.12 | -1.2 |
948,964 | + | ycaK | b0901 | 0.12 | -0.3 |
948,966 | + | ycaK | b0901 | 0.13 | -0.4 |
948,966 | + | ycaK | b0901 | 0.13 | -0.3 |
948,976 | + | ycaK | b0901 | 0.14 | +0.8 |
948,988 | + | ycaK | b0901 | 0.16 | -0.0 |
949,012 | + | ycaK | b0901 | 0.20 | -0.4 |
949,030 | - | ycaK | b0901 | 0.24 | +1.5 |
949,045 | + | ycaK | b0901 | 0.26 | +0.6 |
949,046 | - | ycaK | b0901 | 0.26 | -0.6 |
949,050 | + | ycaK | b0901 | 0.27 | -0.8 |
949,052 | + | ycaK | b0901 | 0.27 | +0.9 |
949,052 | - | ycaK | b0901 | 0.27 | -0.9 |
949,060 | - | ycaK | b0901 | 0.29 | +1.5 |
949,107 | + | ycaK | b0901 | 0.37 | -1.0 |
949,107 | + | ycaK | b0901 | 0.37 | -0.9 |
949,111 | + | ycaK | b0901 | 0.37 | -0.6 |
949,111 | + | ycaK | b0901 | 0.37 | -0.2 |
949,111 | + | ycaK | b0901 | 0.37 | -0.1 |
949,111 | + | ycaK | b0901 | 0.37 | +1.1 |
949,111 | + | ycaK | b0901 | 0.37 | -0.1 |
949,111 | + | ycaK | b0901 | 0.37 | -0.3 |
949,111 | + | ycaK | b0901 | 0.37 | +1.3 |
949,111 | + | ycaK | b0901 | 0.37 | +0.1 |
949,119 | - | ycaK | b0901 | 0.39 | +0.1 |
949,121 | + | ycaK | b0901 | 0.39 | +0.1 |
949,128 | - | ycaK | b0901 | 0.40 | -1.1 |
949,143 | - | ycaK | b0901 | 0.43 | +3.5 |
949,143 | - | ycaK | b0901 | 0.43 | -1.1 |
949,157 | + | ycaK | b0901 | 0.45 | -1.4 |
949,161 | - | ycaK | b0901 | 0.46 | +1.1 |
949,161 | - | ycaK | b0901 | 0.46 | +3.5 |
949,168 | + | ycaK | b0901 | 0.47 | -0.1 |
949,169 | + | ycaK | b0901 | 0.47 | +0.1 |
949,179 | + | ycaK | b0901 | 0.49 | -0.5 |
949,179 | + | ycaK | b0901 | 0.49 | -1.0 |
949,187 | - | ycaK | b0901 | 0.50 | +0.1 |
949,203 | + | ycaK | b0901 | 0.53 | +1.4 |
949,203 | + | ycaK | b0901 | 0.53 | -1.2 |
949,220 | + | ycaK | b0901 | 0.56 | -0.1 |
949,220 | + | ycaK | b0901 | 0.56 | -0.9 |
949,221 | + | ycaK | b0901 | 0.56 | -0.4 |
949,221 | + | ycaK | b0901 | 0.56 | +0.2 |
949,222 | + | ycaK | b0901 | 0.56 | -1.6 |
949,222 | + | ycaK | b0901 | 0.56 | -1.5 |
949,228 | - | ycaK | b0901 | 0.57 | +1.1 |
949,255 | - | ycaK | b0901 | 0.62 | +2.5 |
949,269 | + | ycaK | b0901 | 0.64 | -0.5 |
949,269 | + | ycaK | b0901 | 0.64 | +0.4 |
949,269 | + | ycaK | b0901 | 0.64 | -0.1 |
949,274 | + | ycaK | b0901 | 0.65 | -0.8 |
949,283 | + | ycaK | b0901 | 0.66 | -0.6 |
949,283 | + | ycaK | b0901 | 0.66 | -0.3 |
949,299 | + | ycaK | b0901 | 0.69 | -1.3 |
949,388 | + | ycaK | b0901 | 0.84 | -0.2 |
949,388 | + | ycaK | b0901 | 0.84 | -0.2 |
949,388 | + | ycaK | b0901 | 0.84 | +1.5 |
949,393 | + | ycaK | b0901 | 0.85 | +0.6 |
949,393 | + | ycaK | b0901 | 0.85 | +0.3 |
949,396 | + | ycaK | b0901 | 0.85 | +0.1 |
949,396 | + | ycaK | b0901 | 0.85 | +0.5 |
949,396 | + | ycaK | b0901 | 0.85 | +0.1 |
949,396 | - | ycaK | b0901 | 0.85 | +3.5 |
949,447 | - | +3.5 | |||
949,460 | + | -1.1 | |||
949,460 | + | -0.5 | |||
949,460 | + | -0.6 | |||
949,466 | + | -0.2 | |||
949,468 | - | +3.5 | |||
949,468 | - | +0.8 | |||
949,473 | + | +2.2 | |||
949,476 | + | -0.5 | |||
949,525 | - | +0.6 | |||
949,587 | - | -1.8 | |||
949,587 | - | -1.2 | |||
949,597 | - | -0.7 | |||
949,610 | - | -0.2 | |||
949,611 | + | +4.4 | |||
949,615 | - | -0.5 | |||
949,642 | - | pflA | b0902 | 0.11 | -0.2 |
949,642 | - | pflA | b0902 | 0.11 | -1.2 |
949,648 | + | pflA | b0902 | 0.11 | +1.6 |
949,664 | - | pflA | b0902 | 0.14 | +0.5 |
949,675 | - | pflA | b0902 | 0.15 | +0.5 |
949,685 | - | pflA | b0902 | 0.16 | -0.7 |
Or see this region's nucleotide sequence