Strain Fitness in Escherichia coli BW25113 around b2125

Experiment: Adenosine 0.3742 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyehR and yehS are separated by 39 nucleotidesyehS and yehT are separated by 46 nucleotidesyehT and yehU overlap by 4 nucleotides b2123: yehR - orf, hypothetical protein (VIMSS), at 2,209,247 to 2,209,708 yehR b2124: yehS - hypothetical protein (NCBI), at 2,209,748 to 2,210,218 yehS b2125: yehT - orf, hypothetical protein (VIMSS), at 2,210,265 to 2,210,984 yehT b2126: yehU - predicted sensory kinase in two-component system with YehT (NCBI), at 2,210,981 to 2,212,666 yehU Position (kb) 2210 2211Strain fitness (log2 ratio) -2 -1 0 1 2at 2209.352 kb on - strand, within yehRat 2209.352 kb on - strand, within yehRat 2209.377 kb on + strand, within yehRat 2209.377 kb on + strand, within yehRat 2209.390 kb on - strand, within yehRat 2209.396 kb on + strand, within yehRat 2209.449 kb on - strand, within yehRat 2209.962 kb on - strand, within yehSat 2209.962 kb on - strand, within yehSat 2209.964 kb on - strand, within yehSat 2209.966 kb on - strand, within yehSat 2209.966 kb on - strand, within yehSat 2210.041 kb on - strand, within yehSat 2210.106 kb on - strand, within yehSat 2210.106 kb on - strand, within yehSat 2210.138 kb on - strand, within yehSat 2210.161 kb on + strand, within yehSat 2210.185 kb on + strandat 2210.193 kb on - strandat 2210.203 kb on - strandat 2210.313 kb on - strandat 2210.408 kb on - strand, within yehTat 2210.411 kb on - strand, within yehTat 2210.492 kb on + strand, within yehTat 2210.492 kb on + strand, within yehTat 2210.498 kb on - strand, within yehTat 2210.502 kb on + strand, within yehTat 2210.695 kb on - strand, within yehTat 2210.695 kb on - strand, within yehTat 2210.715 kb on + strand, within yehTat 2210.715 kb on + strand, within yehTat 2210.858 kb on - strand, within yehTat 2210.858 kb on - strand, within yehTat 2210.936 kb on + strandat 2210.954 kb on - strandat 2210.962 kb on - strandat 2210.962 kb on - strandat 2211.049 kb on - strandat 2211.051 kb on + strandat 2211.130 kb on - strandat 2211.130 kb on - strandat 2211.207 kb on - strand, within yehUat 2211.207 kb on - strand, within yehUat 2211.218 kb on - strand, within yehUat 2211.273 kb on - strand, within yehUat 2211.273 kb on - strand, within yehUat 2211.371 kb on - strand, within yehUat 2211.399 kb on - strand, within yehUat 2211.451 kb on - strand, within yehUat 2211.464 kb on - strand, within yehUat 2211.539 kb on - strand, within yehUat 2211.539 kb on - strand, within yehUat 2211.651 kb on + strand, within yehUat 2211.675 kb on + strand, within yehUat 2211.688 kb on - strand, within yehUat 2211.688 kb on - strand, within yehUat 2211.782 kb on - strand, within yehUat 2211.806 kb on - strand, within yehUat 2211.826 kb on + strand, within yehUat 2211.834 kb on - strand, within yehUat 2211.961 kb on - strand, within yehUat 2211.972 kb on - strand, within yehUat 2211.972 kb on - strand, within yehU

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine 0.3742 mM (C)
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2,209,352 - yehR b2123 0.23 +1.8
2,209,352 - yehR b2123 0.23 +0.3
2,209,377 + yehR b2123 0.28 -2.5
2,209,377 + yehR b2123 0.28 +0.2
2,209,390 - yehR b2123 0.31 -1.0
2,209,396 + yehR b2123 0.32 -0.2
2,209,449 - yehR b2123 0.44 +0.1
2,209,962 - yehS b2124 0.45 -0.7
2,209,962 - yehS b2124 0.45 -0.2
2,209,964 - yehS b2124 0.46 -0.6
2,209,966 - yehS b2124 0.46 -0.9
2,209,966 - yehS b2124 0.46 -2.0
2,210,041 - yehS b2124 0.62 +0.1
2,210,106 - yehS b2124 0.76 -0.6
2,210,106 - yehS b2124 0.76 -1.1
2,210,138 - yehS b2124 0.83 -0.2
2,210,161 + yehS b2124 0.88 -0.1
2,210,185 + +0.1
2,210,193 - +0.2
2,210,203 - -0.3
2,210,313 - -0.6
2,210,408 - yehT b2125 0.20 -0.0
2,210,411 - yehT b2125 0.20 -0.0
2,210,492 + yehT b2125 0.32 +0.1
2,210,492 + yehT b2125 0.32 -0.9
2,210,498 - yehT b2125 0.32 -0.5
2,210,502 + yehT b2125 0.33 +1.4
2,210,695 - yehT b2125 0.60 -1.4
2,210,695 - yehT b2125 0.60 +0.3
2,210,715 + yehT b2125 0.62 +0.1
2,210,715 + yehT b2125 0.62 -0.8
2,210,858 - yehT b2125 0.82 +0.1
2,210,858 - yehT b2125 0.82 +0.3
2,210,936 + +0.0
2,210,954 - -0.1
2,210,962 - +0.7
2,210,962 - -0.1
2,211,049 - -0.6
2,211,051 + +0.1
2,211,130 - +0.1
2,211,130 - -1.3
2,211,207 - yehU b2126 0.13 +0.8
2,211,207 - yehU b2126 0.13 -0.0
2,211,218 - yehU b2126 0.14 -0.3
2,211,273 - yehU b2126 0.17 +0.0
2,211,273 - yehU b2126 0.17 -0.1
2,211,371 - yehU b2126 0.23 -0.3
2,211,399 - yehU b2126 0.25 -0.2
2,211,451 - yehU b2126 0.28 +0.1
2,211,464 - yehU b2126 0.29 +0.5
2,211,539 - yehU b2126 0.33 -0.8
2,211,539 - yehU b2126 0.33 -0.1
2,211,651 + yehU b2126 0.40 -0.1
2,211,675 + yehU b2126 0.41 +0.4
2,211,688 - yehU b2126 0.42 +0.1
2,211,688 - yehU b2126 0.42 -0.3
2,211,782 - yehU b2126 0.48 -0.2
2,211,806 - yehU b2126 0.49 +0.3
2,211,826 + yehU b2126 0.50 -1.1
2,211,834 - yehU b2126 0.51 -0.6
2,211,961 - yehU b2126 0.58 -1.2
2,211,972 - yehU b2126 0.59 -1.0
2,211,972 - yehU b2126 0.59 -0.2

Or see this region's nucleotide sequence